Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn2bQ56A07 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn2bQ56A07 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn2bQ56A07 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn2bQ56A07 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Scn2bQ56A07 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn2bQ56A07 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.21■□□□□ 0.35
Scn2bQ56A07 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Scn2bQ56A07 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Scn2bQ56A07 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.21■□□□□ 0.35
Scn2bQ56A07 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Scn2bQ56A07 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn2bQ56A07 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.21■□□□□ 0.35
Scn2bQ56A07 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.21■□□□□ 0.35
Scn2bQ56A07 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scn2bQ56A07 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn2bQ56A07 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.21■□□□□ 0.35
Scn2bQ56A07 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn2bQ56A07 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Scn2bQ56A07 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn2bQ56A07 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn2bQ56A07 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn2bQ56A07 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn2bQ56A07 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn2bQ56A07 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn2bQ56A07 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.2■□□□□ 0.34
Scn2bQ56A07 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn2bQ56A07 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scn2bQ56A07 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn2bQ56A07 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scn2bQ56A07 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn2bQ56A07 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scn2bQ56A07 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.2■□□□□ 0.34
Scn2bQ56A07 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scn2bQ56A07 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn2bQ56A07 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn2bQ56A07 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scn2bQ56A07 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Scn2bQ56A07 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn2bQ56A07 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn2bQ56A07 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scn2bQ56A07 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.19■□□□□ 0.34
Scn2bQ56A07 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.19■□□□□ 0.34
Scn2bQ56A07 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn2bQ56A07 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Scn2bQ56A07 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn2bQ56A07 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.19■□□□□ 0.34
Scn2bQ56A07 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn2bQ56A07 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn2bQ56A07 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scn2bQ56A07 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scn2bQ56A07 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scn2bQ56A07 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn2bQ56A07 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn2bQ56A07 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn2bQ56A07 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Scn2bQ56A07 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Scn2bQ56A07 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn2bQ56A07 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.19■□□□□ 0.34
Scn2bQ56A07 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn2bQ56A07 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn2bQ56A07 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn2bQ56A07 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Scn2bQ56A07 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Scn2bQ56A07 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Scn2bQ56A07 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn2bQ56A07 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Scn2bQ56A07 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.18■□□□□ 0.34
Scn2bQ56A07 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.18■□□□□ 0.34
Scn2bQ56A07 Mir2861-201ENSMUST00000175539 82 ntBASIC17.18■□□□□ 0.34
Scn2bQ56A07 Gm2559-201ENSMUST00000201323 363 ntBASIC17.18■□□□□ 0.34
Scn2bQ56A07 Gm29791-202ENSMUST00000207888 369 ntBASIC17.18■□□□□ 0.34
Scn2bQ56A07 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn2bQ56A07 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn2bQ56A07 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.18■□□□□ 0.34
Scn2bQ56A07 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn2bQ56A07 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Scn2bQ56A07 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.18■□□□□ 0.34
Scn2bQ56A07 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn2bQ56A07 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scn2bQ56A07 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn2bQ56A07 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn2bQ56A07 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.17■□□□□ 0.34
Scn2bQ56A07 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn2bQ56A07 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scn2bQ56A07 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn2bQ56A07 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn2bQ56A07 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn2bQ56A07 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scn2bQ56A07 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.17■□□□□ 0.34
Scn2bQ56A07 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.17■□□□□ 0.34
Scn2bQ56A07 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn2bQ56A07 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scn2bQ56A07 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn2bQ56A07 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Scn2bQ56A07 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn2bQ56A07 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn2bQ56A07 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn2bQ56A07 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scn2bQ56A07 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms