Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rc3h1Q4VGL6 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Rc3h1Q4VGL6 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Rc3h1Q4VGL6 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rc3h1Q4VGL6 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rc3h1Q4VGL6 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rc3h1Q4VGL6 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rc3h1Q4VGL6 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rc3h1Q4VGL6 Gm10013-201ENSMUST00000106074 672 ntBASIC20.06■□□□□ 0.8
Rc3h1Q4VGL6 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Rc3h1Q4VGL6 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rc3h1Q4VGL6 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rc3h1Q4VGL6 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Rc3h1Q4VGL6 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.06■□□□□ 0.8
Rc3h1Q4VGL6 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.06■□□□□ 0.8
Rc3h1Q4VGL6 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rc3h1Q4VGL6 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Rc3h1Q4VGL6 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Rc3h1Q4VGL6 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.06■□□□□ 0.8
Rc3h1Q4VGL6 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rc3h1Q4VGL6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rc3h1Q4VGL6 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rc3h1Q4VGL6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rc3h1Q4VGL6 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rc3h1Q4VGL6 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rc3h1Q4VGL6 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rc3h1Q4VGL6 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Rc3h1Q4VGL6 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rc3h1Q4VGL6 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.05■□□□□ 0.8
Rc3h1Q4VGL6 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rc3h1Q4VGL6 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rc3h1Q4VGL6 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rc3h1Q4VGL6 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rc3h1Q4VGL6 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rc3h1Q4VGL6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rc3h1Q4VGL6 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rc3h1Q4VGL6 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rc3h1Q4VGL6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Rc3h1Q4VGL6 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.05■□□□□ 0.8
Rc3h1Q4VGL6 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.05■□□□□ 0.8
Rc3h1Q4VGL6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rc3h1Q4VGL6 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rc3h1Q4VGL6 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Rc3h1Q4VGL6 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.04■□□□□ 0.8
Rc3h1Q4VGL6 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Rc3h1Q4VGL6 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rc3h1Q4VGL6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.04■□□□□ 0.8
Rc3h1Q4VGL6 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Rc3h1Q4VGL6 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Rc3h1Q4VGL6 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rc3h1Q4VGL6 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
Rc3h1Q4VGL6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.04■□□□□ 0.8
Rc3h1Q4VGL6 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rc3h1Q4VGL6 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rc3h1Q4VGL6 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rc3h1Q4VGL6 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.03■□□□□ 0.8
Rc3h1Q4VGL6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rc3h1Q4VGL6 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.03■□□□□ 0.8
Rc3h1Q4VGL6 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rc3h1Q4VGL6 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rc3h1Q4VGL6 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rc3h1Q4VGL6 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rc3h1Q4VGL6 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rc3h1Q4VGL6 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rc3h1Q4VGL6 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.03■□□□□ 0.8
Rc3h1Q4VGL6 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rc3h1Q4VGL6 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rc3h1Q4VGL6 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rc3h1Q4VGL6 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rc3h1Q4VGL6 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rc3h1Q4VGL6 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rc3h1Q4VGL6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rc3h1Q4VGL6 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rc3h1Q4VGL6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rc3h1Q4VGL6 Gm18101-201ENSMUST00000215769 548 ntBASIC20.02■□□□□ 0.8
Rc3h1Q4VGL6 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.02■□□□□ 0.8
Rc3h1Q4VGL6 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.02■□□□□ 0.8
Rc3h1Q4VGL6 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Rc3h1Q4VGL6 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rc3h1Q4VGL6 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Rc3h1Q4VGL6 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rc3h1Q4VGL6 Gm13474-201ENSMUST00000122466 815 ntBASIC20.01■□□□□ 0.79
Rc3h1Q4VGL6 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.01■□□□□ 0.79
Rc3h1Q4VGL6 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.01■□□□□ 0.79
Rc3h1Q4VGL6 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.01■□□□□ 0.79
Rc3h1Q4VGL6 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rc3h1Q4VGL6 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rc3h1Q4VGL6 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rc3h1Q4VGL6 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rc3h1Q4VGL6 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
Rc3h1Q4VGL6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rc3h1Q4VGL6 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.01■□□□□ 0.79
Rc3h1Q4VGL6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rc3h1Q4VGL6 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rc3h1Q4VGL6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20■□□□□ 0.79
Rc3h1Q4VGL6 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rc3h1Q4VGL6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
Rc3h1Q4VGL6 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20■□□□□ 0.79
Rc3h1Q4VGL6 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rc3h1Q4VGL6 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms