Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Prpf38aQ4FK66 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf38aQ4FK66 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf38aQ4FK66 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf38aQ4FK66 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.26■□□□□ 0.83
Prpf38aQ4FK66 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.26■□□□□ 0.83
Prpf38aQ4FK66 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.26■□□□□ 0.83
Prpf38aQ4FK66 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf38aQ4FK66 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
Prpf38aQ4FK66 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf38aQ4FK66 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Prpf38aQ4FK66 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf38aQ4FK66 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf38aQ4FK66 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf38aQ4FK66 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.25■□□□□ 0.83
Prpf38aQ4FK66 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Prpf38aQ4FK66 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
Prpf38aQ4FK66 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf38aQ4FK66 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Prpf38aQ4FK66 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf38aQ4FK66 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.25■□□□□ 0.83
Prpf38aQ4FK66 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf38aQ4FK66 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.25■□□□□ 0.83
Prpf38aQ4FK66 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf38aQ4FK66 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf38aQ4FK66 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf38aQ4FK66 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.24■□□□□ 0.83
Prpf38aQ4FK66 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf38aQ4FK66 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf38aQ4FK66 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf38aQ4FK66 AA414768-201ENSMUST00000121924 1257 ntBASIC20.24■□□□□ 0.83
Prpf38aQ4FK66 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf38aQ4FK66 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf38aQ4FK66 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf38aQ4FK66 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf38aQ4FK66 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf38aQ4FK66 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf38aQ4FK66 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Prpf38aQ4FK66 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Prpf38aQ4FK66 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf38aQ4FK66 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Prpf38aQ4FK66 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf38aQ4FK66 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf38aQ4FK66 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Prpf38aQ4FK66 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
Prpf38aQ4FK66 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.23■□□□□ 0.83
Prpf38aQ4FK66 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf38aQ4FK66 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf38aQ4FK66 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Prpf38aQ4FK66 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.23■□□□□ 0.83
Prpf38aQ4FK66 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf38aQ4FK66 Mir1668-201ENSMUST00000184114 107 ntBASIC20.23■□□□□ 0.83
Prpf38aQ4FK66 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf38aQ4FK66 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf38aQ4FK66 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf38aQ4FK66 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf38aQ4FK66 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf38aQ4FK66 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Prpf38aQ4FK66 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf38aQ4FK66 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.22■□□□□ 0.83
Prpf38aQ4FK66 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf38aQ4FK66 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.22■□□□□ 0.83
Prpf38aQ4FK66 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf38aQ4FK66 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.22■□□□□ 0.83
Prpf38aQ4FK66 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf38aQ4FK66 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf38aQ4FK66 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prpf38aQ4FK66 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prpf38aQ4FK66 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Prpf38aQ4FK66 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prpf38aQ4FK66 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Prpf38aQ4FK66 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Prpf38aQ4FK66 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.21■□□□□ 0.83
Prpf38aQ4FK66 Gm7213-201ENSMUST00000215977 950 ntBASIC20.21■□□□□ 0.83
Prpf38aQ4FK66 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.21■□□□□ 0.83
Prpf38aQ4FK66 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.21■□□□□ 0.83
Prpf38aQ4FK66 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prpf38aQ4FK66 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prpf38aQ4FK66 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Prpf38aQ4FK66 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Prpf38aQ4FK66 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prpf38aQ4FK66 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf38aQ4FK66 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf38aQ4FK66 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf38aQ4FK66 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf38aQ4FK66 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf38aQ4FK66 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf38aQ4FK66 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf38aQ4FK66 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf38aQ4FK66 Gm21559-201ENSMUST00000220638 855 ntBASIC20.2■□□□□ 0.82
Prpf38aQ4FK66 Gm8587-201ENSMUST00000076538 843 ntBASIC20.2■□□□□ 0.82
Prpf38aQ4FK66 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf38aQ4FK66 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf38aQ4FK66 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf38aQ4FK66 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Prpf38aQ4FK66 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf38aQ4FK66 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf38aQ4FK66 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf38aQ4FK66 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf38aQ4FK66 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms