Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC21.72■■□□□ 1.07
Shank3Q4ACU6 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21.72■■□□□ 1.07
Shank3Q4ACU6 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shank3Q4ACU6 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Shank3Q4ACU6 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shank3Q4ACU6 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Shank3Q4ACU6 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shank3Q4ACU6 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC21.72■■□□□ 1.07
Shank3Q4ACU6 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC21.72■■□□□ 1.07
Shank3Q4ACU6 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shank3Q4ACU6 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Shank3Q4ACU6 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Shank3Q4ACU6 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shank3Q4ACU6 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shank3Q4ACU6 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shank3Q4ACU6 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shank3Q4ACU6 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shank3Q4ACU6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Shank3Q4ACU6 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shank3Q4ACU6 Gm18733-201ENSMUST00000173950 856 ntBASIC21.71■■□□□ 1.07
Shank3Q4ACU6 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Shank3Q4ACU6 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Shank3Q4ACU6 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Shank3Q4ACU6 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shank3Q4ACU6 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
Shank3Q4ACU6 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Shank3Q4ACU6 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Shank3Q4ACU6 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC21.7■■□□□ 1.06
Shank3Q4ACU6 Gm38342-201ENSMUST00000195710 2980 ntBASIC21.7■■□□□ 1.06
Shank3Q4ACU6 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shank3Q4ACU6 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Shank3Q4ACU6 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC21.7■■□□□ 1.06
Shank3Q4ACU6 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shank3Q4ACU6 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shank3Q4ACU6 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shank3Q4ACU6 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shank3Q4ACU6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shank3Q4ACU6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shank3Q4ACU6 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Shank3Q4ACU6 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC21.69■■□□□ 1.06
Shank3Q4ACU6 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shank3Q4ACU6 Gm44357-201ENSMUST00000195897 142 ntBASIC21.69■■□□□ 1.06
Shank3Q4ACU6 Gm19658-201ENSMUST00000196231 138 ntBASIC21.69■■□□□ 1.06
Shank3Q4ACU6 Gm44367-201ENSMUST00000196836 138 ntBASIC21.69■■□□□ 1.06
Shank3Q4ACU6 Gm44350-201ENSMUST00000197197 138 ntBASIC21.69■■□□□ 1.06
Shank3Q4ACU6 Gm44390-201ENSMUST00000197533 144 ntBASIC21.69■■□□□ 1.06
Shank3Q4ACU6 Gm44313-201ENSMUST00000198018 138 ntBASIC21.69■■□□□ 1.06
Shank3Q4ACU6 Gm44486-201ENSMUST00000198508 138 ntBASIC21.69■■□□□ 1.06
Shank3Q4ACU6 Gm44454-201ENSMUST00000198541 138 ntBASIC21.69■■□□□ 1.06
Shank3Q4ACU6 Gm44314-201ENSMUST00000199263 138 ntBASIC21.69■■□□□ 1.06
Shank3Q4ACU6 Gm44394-201ENSMUST00000199558 138 ntBASIC21.69■■□□□ 1.06
Shank3Q4ACU6 Gm44484-201ENSMUST00000199873 138 ntBASIC21.69■■□□□ 1.06
Shank3Q4ACU6 Gm44466-201ENSMUST00000200264 138 ntBASIC21.69■■□□□ 1.06
Shank3Q4ACU6 Gm44359-201ENSMUST00000200671 138 ntBASIC21.69■■□□□ 1.06
Shank3Q4ACU6 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC21.69■■□□□ 1.06
Shank3Q4ACU6 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Shank3Q4ACU6 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC21.69■■□□□ 1.06
Shank3Q4ACU6 AC123834.2-201ENSMUST00000224038 2340 ntBASIC21.69■■□□□ 1.06
Shank3Q4ACU6 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shank3Q4ACU6 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shank3Q4ACU6 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shank3Q4ACU6 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Shank3Q4ACU6 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shank3Q4ACU6 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shank3Q4ACU6 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC21.69■■□□□ 1.06
Shank3Q4ACU6 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Shank3Q4ACU6 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Shank3Q4ACU6 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Shank3Q4ACU6 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Shank3Q4ACU6 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Shank3Q4ACU6 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Shank3Q4ACU6 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC21.67■■□□□ 1.06
Shank3Q4ACU6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
Shank3Q4ACU6 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Shank3Q4ACU6 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Shank3Q4ACU6 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC21.67■■□□□ 1.06
Shank3Q4ACU6 Gm11452-201ENSMUST00000122376 690 ntBASIC21.67■■□□□ 1.06
Shank3Q4ACU6 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC21.67■■□□□ 1.06
Shank3Q4ACU6 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Shank3Q4ACU6 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Shank3Q4ACU6 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Shank3Q4ACU6 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Shank3Q4ACU6 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC21.66■■□□□ 1.06
Shank3Q4ACU6 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC21.66■■□□□ 1.06
Shank3Q4ACU6 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Shank3Q4ACU6 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Shank3Q4ACU6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Shank3Q4ACU6 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Shank3Q4ACU6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Shank3Q4ACU6 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC21.66■■□□□ 1.06
Shank3Q4ACU6 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Shank3Q4ACU6 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Shank3Q4ACU6 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Shank3Q4ACU6 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC21.65■■□□□ 1.06
Shank3Q4ACU6 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Shank3Q4ACU6 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Shank3Q4ACU6 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Shank3Q4ACU6 Gm11336-201ENSMUST00000118168 334 ntBASIC21.65■■□□□ 1.06
Shank3Q4ACU6 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC21.65■■□□□ 1.06
Shank3Q4ACU6 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms