Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lin28bQ45KJ6 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Lin28bQ45KJ6 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lin28bQ45KJ6 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lin28bQ45KJ6 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lin28bQ45KJ6 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lin28bQ45KJ6 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lin28bQ45KJ6 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lin28bQ45KJ6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lin28bQ45KJ6 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lin28bQ45KJ6 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lin28bQ45KJ6 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Lin28bQ45KJ6 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lin28bQ45KJ6 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lin28bQ45KJ6 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
Lin28bQ45KJ6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lin28bQ45KJ6 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Lin28bQ45KJ6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin28bQ45KJ6 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin28bQ45KJ6 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin28bQ45KJ6 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin28bQ45KJ6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lin28bQ45KJ6 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin28bQ45KJ6 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin28bQ45KJ6 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Lin28bQ45KJ6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.51■□□□□ 0.23
Lin28bQ45KJ6 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin28bQ45KJ6 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lin28bQ45KJ6 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.51■□□□□ 0.23
Lin28bQ45KJ6 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin28bQ45KJ6 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Lin28bQ45KJ6 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lin28bQ45KJ6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin28bQ45KJ6 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin28bQ45KJ6 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.51■□□□□ 0.23
Lin28bQ45KJ6 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin28bQ45KJ6 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lin28bQ45KJ6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin28bQ45KJ6 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin28bQ45KJ6 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin28bQ45KJ6 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lin28bQ45KJ6 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lin28bQ45KJ6 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Lin28bQ45KJ6 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin28bQ45KJ6 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin28bQ45KJ6 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin28bQ45KJ6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lin28bQ45KJ6 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin28bQ45KJ6 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.5■□□□□ 0.23
Lin28bQ45KJ6 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lin28bQ45KJ6 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lin28bQ45KJ6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.5■□□□□ 0.23
Lin28bQ45KJ6 Gm18101-201ENSMUST00000215769 548 ntBASIC16.5■□□□□ 0.23
Lin28bQ45KJ6 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin28bQ45KJ6 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.5■□□□□ 0.23
Lin28bQ45KJ6 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lin28bQ45KJ6 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin28bQ45KJ6 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Lin28bQ45KJ6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Lin28bQ45KJ6 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lin28bQ45KJ6 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Lin28bQ45KJ6 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Lin28bQ45KJ6 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lin28bQ45KJ6 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin28bQ45KJ6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin28bQ45KJ6 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lin28bQ45KJ6 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin28bQ45KJ6 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin28bQ45KJ6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin28bQ45KJ6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin28bQ45KJ6 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Lin28bQ45KJ6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin28bQ45KJ6 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lin28bQ45KJ6 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lin28bQ45KJ6 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lin28bQ45KJ6 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.48■□□□□ 0.23
Lin28bQ45KJ6 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lin28bQ45KJ6 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lin28bQ45KJ6 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lin28bQ45KJ6 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lin28bQ45KJ6 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lin28bQ45KJ6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lin28bQ45KJ6 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lin28bQ45KJ6 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lin28bQ45KJ6 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.48■□□□□ 0.23
Lin28bQ45KJ6 Gm7370-201ENSMUST00000219471 767 ntBASIC16.48■□□□□ 0.23
Lin28bQ45KJ6 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lin28bQ45KJ6 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Lin28bQ45KJ6 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lin28bQ45KJ6 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lin28bQ45KJ6 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lin28bQ45KJ6 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lin28bQ45KJ6 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lin28bQ45KJ6 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lin28bQ45KJ6 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lin28bQ45KJ6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lin28bQ45KJ6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.47■□□□□ 0.23
Lin28bQ45KJ6 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Lin28bQ45KJ6 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lin28bQ45KJ6 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms