Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fam196aQ3USH1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Fam196aQ3USH1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Fam196aQ3USH1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Fam196aQ3USH1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Fam196aQ3USH1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Fam196aQ3USH1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Fam196aQ3USH1 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Fam196aQ3USH1 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Fam196aQ3USH1 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
Fam196aQ3USH1 Gm6736-201ENSMUST00000166583 948 ntBASIC17.39■□□□□ 0.37
Fam196aQ3USH1 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Fam196aQ3USH1 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Fam196aQ3USH1 Gm6376-201ENSMUST00000209407 580 ntBASIC17.39■□□□□ 0.37
Fam196aQ3USH1 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Fam196aQ3USH1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Fam196aQ3USH1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Fam196aQ3USH1 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Fam196aQ3USH1 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Fam196aQ3USH1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Fam196aQ3USH1 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.38■□□□□ 0.37
Fam196aQ3USH1 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.38■□□□□ 0.37
Fam196aQ3USH1 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.38■□□□□ 0.37
Fam196aQ3USH1 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.38■□□□□ 0.37
Fam196aQ3USH1 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Fam196aQ3USH1 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Fam196aQ3USH1 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.38■□□□□ 0.37
Fam196aQ3USH1 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.38■□□□□ 0.37
Fam196aQ3USH1 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Fam196aQ3USH1 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Fam196aQ3USH1 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Fam196aQ3USH1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Fam196aQ3USH1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Fam196aQ3USH1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Fam196aQ3USH1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Fam196aQ3USH1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Fam196aQ3USH1 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Fam196aQ3USH1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Fam196aQ3USH1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Fam196aQ3USH1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Fam196aQ3USH1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Fam196aQ3USH1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Fam196aQ3USH1 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Fam196aQ3USH1 Gm7862-201ENSMUST00000121461 292 ntBASIC17.37■□□□□ 0.37
Fam196aQ3USH1 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Fam196aQ3USH1 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.37■□□□□ 0.37
Fam196aQ3USH1 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Fam196aQ3USH1 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Fam196aQ3USH1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Fam196aQ3USH1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Fam196aQ3USH1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Fam196aQ3USH1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.37■□□□□ 0.37
Fam196aQ3USH1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Fam196aQ3USH1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Fam196aQ3USH1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Fam196aQ3USH1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Fam196aQ3USH1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Fam196aQ3USH1 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Fam196aQ3USH1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.36■□□□□ 0.37
Fam196aQ3USH1 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fam196aQ3USH1 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fam196aQ3USH1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fam196aQ3USH1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.36■□□□□ 0.37
Fam196aQ3USH1 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Fam196aQ3USH1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Fam196aQ3USH1 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.36■□□□□ 0.37
Fam196aQ3USH1 Gm5264-201ENSMUST00000190584 848 ntBASIC17.36■□□□□ 0.37
Fam196aQ3USH1 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fam196aQ3USH1 Gm43575-201ENSMUST00000196420 516 ntBASIC17.36■□□□□ 0.37
Fam196aQ3USH1 Gm5364-201ENSMUST00000216789 889 ntBASIC17.36■□□□□ 0.37
Fam196aQ3USH1 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Fam196aQ3USH1 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fam196aQ3USH1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fam196aQ3USH1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fam196aQ3USH1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fam196aQ3USH1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Fam196aQ3USH1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Fam196aQ3USH1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Fam196aQ3USH1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Fam196aQ3USH1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Fam196aQ3USH1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Fam196aQ3USH1 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.35■□□□□ 0.37
Fam196aQ3USH1 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.35■□□□□ 0.37
Fam196aQ3USH1 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Fam196aQ3USH1 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Fam196aQ3USH1 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Fam196aQ3USH1 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.35■□□□□ 0.37
Fam196aQ3USH1 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Fam196aQ3USH1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Fam196aQ3USH1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.34■□□□□ 0.37
Fam196aQ3USH1 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Fam196aQ3USH1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fam196aQ3USH1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Fam196aQ3USH1 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fam196aQ3USH1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fam196aQ3USH1 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.34■□□□□ 0.37
Fam196aQ3USH1 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fam196aQ3USH1 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fam196aQ3USH1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fam196aQ3USH1 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms