Protein–RNA interactions for Protein: Q3UQI9

Mindy4, Probable ubiquitin carboxyl-terminal hydrolase MINDY-4, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4Q3UQI9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mindy4Q3UQI9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mindy4Q3UQI9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mindy4Q3UQI9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mindy4Q3UQI9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mindy4Q3UQI9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mindy4Q3UQI9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mindy4Q3UQI9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.2■□□□□ 0.66
Mindy4Q3UQI9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Mindy4Q3UQI9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Mindy4Q3UQI9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Mindy4Q3UQI9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mindy4Q3UQI9 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.2■□□□□ 0.66
Mindy4Q3UQI9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mindy4Q3UQI9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mindy4Q3UQI9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mindy4Q3UQI9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Mindy4Q3UQI9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mindy4Q3UQI9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mindy4Q3UQI9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mindy4Q3UQI9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mindy4Q3UQI9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Mindy4Q3UQI9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mindy4Q3UQI9 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Mindy4Q3UQI9 AC133083.1-201ENSMUST00000221736 2209 ntBASIC19.19■□□□□ 0.66
Mindy4Q3UQI9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mindy4Q3UQI9 Mir8112-201ENSMUST00000184382 131 ntBASIC19.19■□□□□ 0.66
Mindy4Q3UQI9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.19■□□□□ 0.66
Mindy4Q3UQI9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mindy4Q3UQI9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC19.19■□□□□ 0.66
Mindy4Q3UQI9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mindy4Q3UQI9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Mindy4Q3UQI9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.19■□□□□ 0.66
Mindy4Q3UQI9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Mindy4Q3UQI9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Mindy4Q3UQI9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mindy4Q3UQI9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mindy4Q3UQI9 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.18■□□□□ 0.66
Mindy4Q3UQI9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mindy4Q3UQI9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Mindy4Q3UQI9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.18■□□□□ 0.66
Mindy4Q3UQI9 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.18■□□□□ 0.66
Mindy4Q3UQI9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mindy4Q3UQI9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mindy4Q3UQI9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Mindy4Q3UQI9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mindy4Q3UQI9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mindy4Q3UQI9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Mindy4Q3UQI9 Gm16011-201ENSMUST00000121567 2662 ntBASIC19.18■□□□□ 0.66
Mindy4Q3UQI9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mindy4Q3UQI9 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mindy4Q3UQI9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Mindy4Q3UQI9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mindy4Q3UQI9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Mindy4Q3UQI9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Mindy4Q3UQI9 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mindy4Q3UQI9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
Mindy4Q3UQI9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Mindy4Q3UQI9 Gm11421-201ENSMUST00000122124 294 ntBASIC19.17■□□□□ 0.66
Mindy4Q3UQI9 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.17■□□□□ 0.66
Mindy4Q3UQI9 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.17■□□□□ 0.66
Mindy4Q3UQI9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Mindy4Q3UQI9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mindy4Q3UQI9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mindy4Q3UQI9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mindy4Q3UQI9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mindy4Q3UQI9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mindy4Q3UQI9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mindy4Q3UQI9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Mindy4Q3UQI9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mindy4Q3UQI9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mindy4Q3UQI9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC19.16■□□□□ 0.66
Mindy4Q3UQI9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Mindy4Q3UQI9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mindy4Q3UQI9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.16■□□□□ 0.66
Mindy4Q3UQI9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Mindy4Q3UQI9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Mindy4Q3UQI9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mindy4Q3UQI9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mindy4Q3UQI9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mindy4Q3UQI9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mindy4Q3UQI9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.16■□□□□ 0.66
Mindy4Q3UQI9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mindy4Q3UQI9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Mindy4Q3UQI9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mindy4Q3UQI9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mindy4Q3UQI9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Mindy4Q3UQI9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mindy4Q3UQI9 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mindy4Q3UQI9 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mindy4Q3UQI9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC19.15■□□□□ 0.66
Mindy4Q3UQI9 Gm12251-201ENSMUST00000117893 792 ntBASIC19.15■□□□□ 0.66
Mindy4Q3UQI9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Mindy4Q3UQI9 Gm13241-201ENSMUST00000094493 780 ntBASIC19.15■□□□□ 0.66
Mindy4Q3UQI9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Mindy4Q3UQI9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mindy4Q3UQI9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mindy4Q3UQI9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mindy4Q3UQI9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Mindy4Q3UQI9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms