Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smcr8Q3UMB5 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Smcr8Q3UMB5 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smcr8Q3UMB5 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Smcr8Q3UMB5 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Smcr8Q3UMB5 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smcr8Q3UMB5 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smcr8Q3UMB5 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Smcr8Q3UMB5 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smcr8Q3UMB5 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smcr8Q3UMB5 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smcr8Q3UMB5 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Smcr8Q3UMB5 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smcr8Q3UMB5 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Smcr8Q3UMB5 Gm2274-201ENSMUST00000184539 609 ntBASIC18.66■□□□□ 0.58
Smcr8Q3UMB5 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.66■□□□□ 0.58
Smcr8Q3UMB5 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smcr8Q3UMB5 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smcr8Q3UMB5 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smcr8Q3UMB5 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smcr8Q3UMB5 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Smcr8Q3UMB5 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smcr8Q3UMB5 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smcr8Q3UMB5 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smcr8Q3UMB5 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smcr8Q3UMB5 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Smcr8Q3UMB5 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smcr8Q3UMB5 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smcr8Q3UMB5 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Smcr8Q3UMB5 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Smcr8Q3UMB5 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smcr8Q3UMB5 Gm45058-201ENSMUST00000205810 766 ntBASIC18.65■□□□□ 0.58
Smcr8Q3UMB5 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smcr8Q3UMB5 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smcr8Q3UMB5 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smcr8Q3UMB5 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smcr8Q3UMB5 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.65■□□□□ 0.58
Smcr8Q3UMB5 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smcr8Q3UMB5 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smcr8Q3UMB5 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smcr8Q3UMB5 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smcr8Q3UMB5 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.65■□□□□ 0.58
Smcr8Q3UMB5 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smcr8Q3UMB5 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smcr8Q3UMB5 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smcr8Q3UMB5 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smcr8Q3UMB5 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Smcr8Q3UMB5 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smcr8Q3UMB5 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smcr8Q3UMB5 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.64■□□□□ 0.57
Smcr8Q3UMB5 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smcr8Q3UMB5 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smcr8Q3UMB5 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smcr8Q3UMB5 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.64■□□□□ 0.57
Smcr8Q3UMB5 Gm24841-201ENSMUST00000158676 357 ntBASIC18.64■□□□□ 0.57
Smcr8Q3UMB5 Mir5130-201ENSMUST00000175160 84 ntBASIC18.64■□□□□ 0.57
Smcr8Q3UMB5 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smcr8Q3UMB5 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smcr8Q3UMB5 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Smcr8Q3UMB5 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.64■□□□□ 0.57
Smcr8Q3UMB5 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smcr8Q3UMB5 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smcr8Q3UMB5 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smcr8Q3UMB5 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Smcr8Q3UMB5 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smcr8Q3UMB5 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smcr8Q3UMB5 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smcr8Q3UMB5 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.64■□□□□ 0.57
Smcr8Q3UMB5 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Smcr8Q3UMB5 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smcr8Q3UMB5 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smcr8Q3UMB5 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smcr8Q3UMB5 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Smcr8Q3UMB5 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smcr8Q3UMB5 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smcr8Q3UMB5 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.63■□□□□ 0.57
Smcr8Q3UMB5 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Smcr8Q3UMB5 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Smcr8Q3UMB5 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.63■□□□□ 0.57
Smcr8Q3UMB5 Gm6659-201ENSMUST00000174752 547 ntBASIC18.63■□□□□ 0.57
Smcr8Q3UMB5 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smcr8Q3UMB5 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smcr8Q3UMB5 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Smcr8Q3UMB5 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smcr8Q3UMB5 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smcr8Q3UMB5 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Smcr8Q3UMB5 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smcr8Q3UMB5 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smcr8Q3UMB5 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smcr8Q3UMB5 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smcr8Q3UMB5 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.62■□□□□ 0.57
Smcr8Q3UMB5 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Smcr8Q3UMB5 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smcr8Q3UMB5 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smcr8Q3UMB5 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.62■□□□□ 0.57
Smcr8Q3UMB5 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Smcr8Q3UMB5 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smcr8Q3UMB5 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smcr8Q3UMB5 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smcr8Q3UMB5 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms