Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Upf3aQ3ULJ3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.27■□□□□ 0.52
Upf3aQ3ULJ3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Upf3aQ3ULJ3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Upf3aQ3ULJ3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Upf3aQ3ULJ3 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.27■□□□□ 0.52
Upf3aQ3ULJ3 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Upf3aQ3ULJ3 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Upf3aQ3ULJ3 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Upf3aQ3ULJ3 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.27■□□□□ 0.52
Upf3aQ3ULJ3 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Upf3aQ3ULJ3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Upf3aQ3ULJ3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Upf3aQ3ULJ3 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Upf3aQ3ULJ3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Upf3aQ3ULJ3 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
Upf3aQ3ULJ3 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Upf3aQ3ULJ3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Upf3aQ3ULJ3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.27■□□□□ 0.51
Upf3aQ3ULJ3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Upf3aQ3ULJ3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Upf3aQ3ULJ3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Upf3aQ3ULJ3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Upf3aQ3ULJ3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.26■□□□□ 0.51
Upf3aQ3ULJ3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Upf3aQ3ULJ3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Upf3aQ3ULJ3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Upf3aQ3ULJ3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Upf3aQ3ULJ3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Upf3aQ3ULJ3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Upf3aQ3ULJ3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Upf3aQ3ULJ3 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Upf3aQ3ULJ3 Gm37722-201ENSMUST00000193757 208 ntBASIC18.26■□□□□ 0.51
Upf3aQ3ULJ3 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Upf3aQ3ULJ3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Upf3aQ3ULJ3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Upf3aQ3ULJ3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Upf3aQ3ULJ3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Upf3aQ3ULJ3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Upf3aQ3ULJ3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.26■□□□□ 0.51
Upf3aQ3ULJ3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upf3aQ3ULJ3 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upf3aQ3ULJ3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Upf3aQ3ULJ3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Upf3aQ3ULJ3 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upf3aQ3ULJ3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Upf3aQ3ULJ3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upf3aQ3ULJ3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upf3aQ3ULJ3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.25■□□□□ 0.51
Upf3aQ3ULJ3 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Upf3aQ3ULJ3 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upf3aQ3ULJ3 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upf3aQ3ULJ3 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Upf3aQ3ULJ3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upf3aQ3ULJ3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upf3aQ3ULJ3 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.25■□□□□ 0.51
Upf3aQ3ULJ3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upf3aQ3ULJ3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Upf3aQ3ULJ3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upf3aQ3ULJ3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upf3aQ3ULJ3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upf3aQ3ULJ3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Upf3aQ3ULJ3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Upf3aQ3ULJ3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upf3aQ3ULJ3 Gm27357-201ENSMUST00000183754 135 ntBASIC18.24■□□□□ 0.51
Upf3aQ3ULJ3 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Upf3aQ3ULJ3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upf3aQ3ULJ3 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.24■□□□□ 0.51
Upf3aQ3ULJ3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upf3aQ3ULJ3 Fst-202ENSMUST00000223640 2612 ntBASIC18.24■□□□□ 0.51
Upf3aQ3ULJ3 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Upf3aQ3ULJ3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Upf3aQ3ULJ3 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upf3aQ3ULJ3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Upf3aQ3ULJ3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upf3aQ3ULJ3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Upf3aQ3ULJ3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Upf3aQ3ULJ3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upf3aQ3ULJ3 Gm6623-201ENSMUST00000173570 544 ntBASIC18.23■□□□□ 0.51
Upf3aQ3ULJ3 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upf3aQ3ULJ3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Upf3aQ3ULJ3 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upf3aQ3ULJ3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upf3aQ3ULJ3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Upf3aQ3ULJ3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Upf3aQ3ULJ3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.23■□□□□ 0.51
Upf3aQ3ULJ3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Upf3aQ3ULJ3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.23■□□□□ 0.51
Upf3aQ3ULJ3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upf3aQ3ULJ3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.22■□□□□ 0.51
Upf3aQ3ULJ3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upf3aQ3ULJ3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Upf3aQ3ULJ3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upf3aQ3ULJ3 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Upf3aQ3ULJ3 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upf3aQ3ULJ3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.22■□□□□ 0.51
Upf3aQ3ULJ3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.22■□□□□ 0.51
Upf3aQ3ULJ3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Upf3aQ3ULJ3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upf3aQ3ULJ3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms