Protein–RNA interactions for Protein: Q3UHU5

Mtcl1, Microtubule cross-linking factor 1, mousemouse

Predictions only

Length 1,945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mtcl1Q3UHU5 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mtcl1Q3UHU5 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC20.64■□□□□ 0.89
Mtcl1Q3UHU5 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Mtcl1Q3UHU5 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mtcl1Q3UHU5 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Mtcl1Q3UHU5 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mtcl1Q3UHU5 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mtcl1Q3UHU5 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mtcl1Q3UHU5 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mtcl1Q3UHU5 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mtcl1Q3UHU5 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC20.63■□□□□ 0.89
Mtcl1Q3UHU5 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mtcl1Q3UHU5 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Mtcl1Q3UHU5 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mtcl1Q3UHU5 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mtcl1Q3UHU5 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mtcl1Q3UHU5 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Mtcl1Q3UHU5 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Mtcl1Q3UHU5 AC138767.1-201ENSMUST00000222661 415 ntBASIC20.63■□□□□ 0.89
Mtcl1Q3UHU5 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Mtcl1Q3UHU5 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mtcl1Q3UHU5 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mtcl1Q3UHU5 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mtcl1Q3UHU5 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mtcl1Q3UHU5 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mtcl1Q3UHU5 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Mtcl1Q3UHU5 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mtcl1Q3UHU5 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mtcl1Q3UHU5 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mtcl1Q3UHU5 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Mtcl1Q3UHU5 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Mtcl1Q3UHU5 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mtcl1Q3UHU5 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mtcl1Q3UHU5 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mtcl1Q3UHU5 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Mtcl1Q3UHU5 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mtcl1Q3UHU5 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Mtcl1Q3UHU5 AC161829.1-201ENSMUST00000220298 281 ntBASIC20.61■□□□□ 0.89
Mtcl1Q3UHU5 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mtcl1Q3UHU5 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mtcl1Q3UHU5 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Mtcl1Q3UHU5 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mtcl1Q3UHU5 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mtcl1Q3UHU5 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mtcl1Q3UHU5 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mtcl1Q3UHU5 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Mtcl1Q3UHU5 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mtcl1Q3UHU5 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mtcl1Q3UHU5 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Mtcl1Q3UHU5 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Mtcl1Q3UHU5 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Mtcl1Q3UHU5 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mtcl1Q3UHU5 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC20.61■□□□□ 0.89
Mtcl1Q3UHU5 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Mtcl1Q3UHU5 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mtcl1Q3UHU5 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mtcl1Q3UHU5 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mtcl1Q3UHU5 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mtcl1Q3UHU5 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Mtcl1Q3UHU5 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mtcl1Q3UHU5 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC20.6■□□□□ 0.89
Mtcl1Q3UHU5 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC20.6■□□□□ 0.89
Mtcl1Q3UHU5 Gm27000-201ENSMUST00000182943 842 ntBASIC20.6■□□□□ 0.89
Mtcl1Q3UHU5 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mtcl1Q3UHU5 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mtcl1Q3UHU5 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mtcl1Q3UHU5 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mtcl1Q3UHU5 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Mtcl1Q3UHU5 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mtcl1Q3UHU5 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mtcl1Q3UHU5 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Mtcl1Q3UHU5 Rps4l-201ENSMUST00000071745 943 ntBASIC20.59■□□□□ 0.89
Mtcl1Q3UHU5 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Mtcl1Q3UHU5 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mtcl1Q3UHU5 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mtcl1Q3UHU5 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Mtcl1Q3UHU5 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mtcl1Q3UHU5 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mtcl1Q3UHU5 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mtcl1Q3UHU5 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mtcl1Q3UHU5 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mtcl1Q3UHU5 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Mtcl1Q3UHU5 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mtcl1Q3UHU5 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mtcl1Q3UHU5 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC20.59■□□□□ 0.89
Mtcl1Q3UHU5 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC20.59■□□□□ 0.89
Mtcl1Q3UHU5 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Mtcl1Q3UHU5 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.58■□□□□ 0.89
Mtcl1Q3UHU5 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Mtcl1Q3UHU5 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Mtcl1Q3UHU5 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC20.58■□□□□ 0.88
Mtcl1Q3UHU5 Vti1a-206ENSMUST00000225529 1244 ntBASIC20.58■□□□□ 0.88
Mtcl1Q3UHU5 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Mtcl1Q3UHU5 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Mtcl1Q3UHU5 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC20.57■□□□□ 0.88
Mtcl1Q3UHU5 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC20.57■□□□□ 0.88
Mtcl1Q3UHU5 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC20.57■□□□□ 0.88
Mtcl1Q3UHU5 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC20.57■□□□□ 0.88
Mtcl1Q3UHU5 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mtcl1Q3UHU5 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms