Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col5a2Q3U962 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col5a2Q3U962 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col5a2Q3U962 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col5a2Q3U962 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col5a2Q3U962 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Col5a2Q3U962 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Col5a2Q3U962 Golph3-205ENSMUST00000228671 2842 ntBASIC20.62■□□□□ 0.89
Col5a2Q3U962 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC20.62■□□□□ 0.89
Col5a2Q3U962 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col5a2Q3U962 Gm10052-201ENSMUST00000168019 960 ntBASIC20.62■□□□□ 0.89
Col5a2Q3U962 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC20.62■□□□□ 0.89
Col5a2Q3U962 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Col5a2Q3U962 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Col5a2Q3U962 Gm7729-201ENSMUST00000050143 801 ntBASIC20.62■□□□□ 0.89
Col5a2Q3U962 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col5a2Q3U962 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col5a2Q3U962 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col5a2Q3U962 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col5a2Q3U962 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col5a2Q3U962 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col5a2Q3U962 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col5a2Q3U962 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col5a2Q3U962 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col5a2Q3U962 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col5a2Q3U962 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col5a2Q3U962 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Col5a2Q3U962 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Col5a2Q3U962 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col5a2Q3U962 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Col5a2Q3U962 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col5a2Q3U962 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col5a2Q3U962 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col5a2Q3U962 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Col5a2Q3U962 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC20.61■□□□□ 0.89
Col5a2Q3U962 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Col5a2Q3U962 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Col5a2Q3U962 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC20.6■□□□□ 0.89
Col5a2Q3U962 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col5a2Q3U962 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col5a2Q3U962 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.6■□□□□ 0.89
Col5a2Q3U962 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col5a2Q3U962 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Col5a2Q3U962 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col5a2Q3U962 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col5a2Q3U962 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col5a2Q3U962 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
Col5a2Q3U962 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC20.6■□□□□ 0.89
Col5a2Q3U962 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC20.6■□□□□ 0.89
Col5a2Q3U962 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC20.6■□□□□ 0.89
Col5a2Q3U962 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Col5a2Q3U962 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col5a2Q3U962 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Col5a2Q3U962 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col5a2Q3U962 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col5a2Q3U962 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col5a2Q3U962 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col5a2Q3U962 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Col5a2Q3U962 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.59■□□□□ 0.89
Col5a2Q3U962 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Col5a2Q3U962 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col5a2Q3U962 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Col5a2Q3U962 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Col5a2Q3U962 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.59■□□□□ 0.89
Col5a2Q3U962 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col5a2Q3U962 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col5a2Q3U962 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col5a2Q3U962 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col5a2Q3U962 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col5a2Q3U962 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col5a2Q3U962 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Col5a2Q3U962 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col5a2Q3U962 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col5a2Q3U962 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC20.58■□□□□ 0.89
Col5a2Q3U962 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Col5a2Q3U962 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC20.58■□□□□ 0.89
Col5a2Q3U962 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Col5a2Q3U962 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Col5a2Q3U962 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.58■□□□□ 0.88
Col5a2Q3U962 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col5a2Q3U962 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Col5a2Q3U962 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col5a2Q3U962 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col5a2Q3U962 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Col5a2Q3U962 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Col5a2Q3U962 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC20.57■□□□□ 0.88
Col5a2Q3U962 Gm1401-201ENSMUST00000122048 772 ntBASIC20.57■□□□□ 0.88
Col5a2Q3U962 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Col5a2Q3U962 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Col5a2Q3U962 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col5a2Q3U962 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Col5a2Q3U962 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.57■□□□□ 0.88
Col5a2Q3U962 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col5a2Q3U962 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col5a2Q3U962 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col5a2Q3U962 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col5a2Q3U962 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col5a2Q3U962 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC20.56■□□□□ 0.88
Col5a2Q3U962 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Col5a2Q3U962 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms