Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
Shcbp1lQ3TTP0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Shcbp1lQ3TTP0 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shcbp1lQ3TTP0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Shcbp1lQ3TTP0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shcbp1lQ3TTP0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shcbp1lQ3TTP0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shcbp1lQ3TTP0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shcbp1lQ3TTP0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Shcbp1lQ3TTP0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shcbp1lQ3TTP0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.51■□□□□ 0.39
Shcbp1lQ3TTP0 Gm13401-201ENSMUST00000117074 291 ntBASIC17.51■□□□□ 0.39
Shcbp1lQ3TTP0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Shcbp1lQ3TTP0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.51■□□□□ 0.39
Shcbp1lQ3TTP0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.51■□□□□ 0.39
Shcbp1lQ3TTP0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Shcbp1lQ3TTP0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shcbp1lQ3TTP0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.51■□□□□ 0.39
Shcbp1lQ3TTP0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shcbp1lQ3TTP0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Shcbp1lQ3TTP0 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.5■□□□□ 0.39
Shcbp1lQ3TTP0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Shcbp1lQ3TTP0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shcbp1lQ3TTP0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.5■□□□□ 0.39
Shcbp1lQ3TTP0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Shcbp1lQ3TTP0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.5■□□□□ 0.39
Shcbp1lQ3TTP0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Shcbp1lQ3TTP0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shcbp1lQ3TTP0 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shcbp1lQ3TTP0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Shcbp1lQ3TTP0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shcbp1lQ3TTP0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shcbp1lQ3TTP0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shcbp1lQ3TTP0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shcbp1lQ3TTP0 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Shcbp1lQ3TTP0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Shcbp1lQ3TTP0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shcbp1lQ3TTP0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.49■□□□□ 0.39
Shcbp1lQ3TTP0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shcbp1lQ3TTP0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shcbp1lQ3TTP0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shcbp1lQ3TTP0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shcbp1lQ3TTP0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Shcbp1lQ3TTP0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.49■□□□□ 0.39
Shcbp1lQ3TTP0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shcbp1lQ3TTP0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shcbp1lQ3TTP0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Shcbp1lQ3TTP0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shcbp1lQ3TTP0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shcbp1lQ3TTP0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shcbp1lQ3TTP0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shcbp1lQ3TTP0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shcbp1lQ3TTP0 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shcbp1lQ3TTP0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shcbp1lQ3TTP0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Shcbp1lQ3TTP0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shcbp1lQ3TTP0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shcbp1lQ3TTP0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shcbp1lQ3TTP0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shcbp1lQ3TTP0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shcbp1lQ3TTP0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shcbp1lQ3TTP0 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shcbp1lQ3TTP0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Shcbp1lQ3TTP0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Shcbp1lQ3TTP0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shcbp1lQ3TTP0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shcbp1lQ3TTP0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Shcbp1lQ3TTP0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shcbp1lQ3TTP0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shcbp1lQ3TTP0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shcbp1lQ3TTP0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.48■□□□□ 0.39
Shcbp1lQ3TTP0 Gm10231-201ENSMUST00000181584 441 ntBASIC17.48■□□□□ 0.39
Shcbp1lQ3TTP0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shcbp1lQ3TTP0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Shcbp1lQ3TTP0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Shcbp1lQ3TTP0 Gm10175-202ENSMUST00000208752 441 ntBASIC17.48■□□□□ 0.39
Shcbp1lQ3TTP0 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.48■□□□□ 0.39
Shcbp1lQ3TTP0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shcbp1lQ3TTP0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Shcbp1lQ3TTP0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shcbp1lQ3TTP0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.48■□□□□ 0.39
Shcbp1lQ3TTP0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shcbp1lQ3TTP0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Shcbp1lQ3TTP0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shcbp1lQ3TTP0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shcbp1lQ3TTP0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shcbp1lQ3TTP0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.48■□□□□ 0.39
Shcbp1lQ3TTP0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shcbp1lQ3TTP0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shcbp1lQ3TTP0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Shcbp1lQ3TTP0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shcbp1lQ3TTP0 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.47■□□□□ 0.39
Shcbp1lQ3TTP0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shcbp1lQ3TTP0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Shcbp1lQ3TTP0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Shcbp1lQ3TTP0 Gm7889-201ENSMUST00000185591 958 ntBASIC17.47■□□□□ 0.39
Shcbp1lQ3TTP0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shcbp1lQ3TTP0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shcbp1lQ3TTP0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.47■□□□□ 0.39
Shcbp1lQ3TTP0 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms