Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Khdc4Q3TCX3 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Khdc4Q3TCX3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Khdc4Q3TCX3 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Khdc4Q3TCX3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Khdc4Q3TCX3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Khdc4Q3TCX3 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Khdc4Q3TCX3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Khdc4Q3TCX3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Khdc4Q3TCX3 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.54■□□□□ 0.24
Khdc4Q3TCX3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.54■□□□□ 0.24
Khdc4Q3TCX3 Mir6349-201ENSMUST00000184059 97 ntBASIC16.54■□□□□ 0.24
Khdc4Q3TCX3 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.54■□□□□ 0.24
Khdc4Q3TCX3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Khdc4Q3TCX3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Khdc4Q3TCX3 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Khdc4Q3TCX3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Khdc4Q3TCX3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Khdc4Q3TCX3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Khdc4Q3TCX3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Khdc4Q3TCX3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Khdc4Q3TCX3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Khdc4Q3TCX3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Khdc4Q3TCX3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Khdc4Q3TCX3 Timm23-208ENSMUST00000226683 750 ntBASIC16.53■□□□□ 0.24
Khdc4Q3TCX3 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Khdc4Q3TCX3 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Khdc4Q3TCX3 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Khdc4Q3TCX3 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.53■□□□□ 0.24
Khdc4Q3TCX3 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Khdc4Q3TCX3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Khdc4Q3TCX3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Khdc4Q3TCX3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Khdc4Q3TCX3 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.53■□□□□ 0.24
Khdc4Q3TCX3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Khdc4Q3TCX3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Khdc4Q3TCX3 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Khdc4Q3TCX3 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Khdc4Q3TCX3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.52■□□□□ 0.24
Khdc4Q3TCX3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Khdc4Q3TCX3 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.52■□□□□ 0.24
Khdc4Q3TCX3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Khdc4Q3TCX3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Khdc4Q3TCX3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Khdc4Q3TCX3 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Khdc4Q3TCX3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Khdc4Q3TCX3 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Khdc4Q3TCX3 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Khdc4Q3TCX3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Khdc4Q3TCX3 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Khdc4Q3TCX3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Khdc4Q3TCX3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Khdc4Q3TCX3 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc4Q3TCX3 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc4Q3TCX3 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Khdc4Q3TCX3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc4Q3TCX3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc4Q3TCX3 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc4Q3TCX3 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc4Q3TCX3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.51■□□□□ 0.23
Khdc4Q3TCX3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc4Q3TCX3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Khdc4Q3TCX3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.51■□□□□ 0.23
Khdc4Q3TCX3 Gm11539-201ENSMUST00000119837 557 ntBASIC16.51■□□□□ 0.23
Khdc4Q3TCX3 Gm13436-201ENSMUST00000120418 567 ntBASIC16.51■□□□□ 0.23
Khdc4Q3TCX3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc4Q3TCX3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc4Q3TCX3 Odf3b-204ENSMUST00000227834 930 ntBASIC16.51■□□□□ 0.23
Khdc4Q3TCX3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc4Q3TCX3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc4Q3TCX3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc4Q3TCX3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc4Q3TCX3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc4Q3TCX3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc4Q3TCX3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Khdc4Q3TCX3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc4Q3TCX3 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc4Q3TCX3 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc4Q3TCX3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc4Q3TCX3 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Khdc4Q3TCX3 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Khdc4Q3TCX3 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Khdc4Q3TCX3 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Khdc4Q3TCX3 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Khdc4Q3TCX3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Khdc4Q3TCX3 Gm13559-201ENSMUST00000120476 863 ntBASIC16.5■□□□□ 0.23
Khdc4Q3TCX3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.5■□□□□ 0.23
Khdc4Q3TCX3 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.5■□□□□ 0.23
Khdc4Q3TCX3 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.5■□□□□ 0.23
Khdc4Q3TCX3 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Khdc4Q3TCX3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Khdc4Q3TCX3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Khdc4Q3TCX3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Khdc4Q3TCX3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Khdc4Q3TCX3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Khdc4Q3TCX3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Khdc4Q3TCX3 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Khdc4Q3TCX3 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Khdc4Q3TCX3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Khdc4Q3TCX3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms