Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Q3KNL4 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.1■□□□□ 0.33
Q3KNL4 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q3KNL4 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q3KNL4 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Q3KNL4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q3KNL4 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Q3KNL4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q3KNL4 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q3KNL4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q3KNL4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q3KNL4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q3KNL4 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q3KNL4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q3KNL4 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.1■□□□□ 0.33
Q3KNL4 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Q3KNL4 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.09■□□□□ 0.33
Q3KNL4 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.09■□□□□ 0.33
Q3KNL4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Q3KNL4 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q3KNL4 Gm10418-201ENSMUST00000100943 576 ntBASIC17.09■□□□□ 0.33
Q3KNL4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Q3KNL4 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Q3KNL4 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q3KNL4 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Q3KNL4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.09■□□□□ 0.33
Q3KNL4 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Q3KNL4 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Q3KNL4 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q3KNL4 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.09■□□□□ 0.33
Q3KNL4 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q3KNL4 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q3KNL4 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Q3KNL4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Q3KNL4 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Q3KNL4 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.08■□□□□ 0.33
Q3KNL4 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Q3KNL4 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Q3KNL4 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Q3KNL4 Gm26524-201ENSMUST00000192339 390 ntBASIC17.08■□□□□ 0.32
Q3KNL4 Rab3c-203ENSMUST00000224180 967 ntBASIC17.08■□□□□ 0.32
Q3KNL4 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Q3KNL4 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Q3KNL4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Q3KNL4 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q3KNL4 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q3KNL4 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q3KNL4 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q3KNL4 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q3KNL4 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q3KNL4 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q3KNL4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Q3KNL4 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q3KNL4 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.07■□□□□ 0.32
Q3KNL4 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q3KNL4 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q3KNL4 Gm13148-201ENSMUST00000118892 745 ntBASIC17.07■□□□□ 0.32
Q3KNL4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q3KNL4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Q3KNL4 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q3KNL4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Q3KNL4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q3KNL4 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q3KNL4 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q3KNL4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.07■□□□□ 0.32
Q3KNL4 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q3KNL4 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q3KNL4 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q3KNL4 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q3KNL4 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q3KNL4 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Q3KNL4 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Q3KNL4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Q3KNL4 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q3KNL4 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q3KNL4 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.06■□□□□ 0.32
Q3KNL4 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Q3KNL4 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Q3KNL4 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Q3KNL4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Q3KNL4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q3KNL4 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.06■□□□□ 0.32
Q3KNL4 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q3KNL4 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q3KNL4 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.06■□□□□ 0.32
Q3KNL4 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Q3KNL4 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q3KNL4 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Q3KNL4 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q3KNL4 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Q3KNL4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q3KNL4 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Q3KNL4 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Q3KNL4 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Q3KNL4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Q3KNL4 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Q3KNL4 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Q3KNL4 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.05■□□□□ 0.32
Q3KNL4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Q3KNL4 Gm5408-201ENSMUST00000197998 747 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms