Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Ush2AQ2QI47 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Ush2AQ2QI47 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ush2AQ2QI47 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ush2AQ2QI47 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Ush2AQ2QI47 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ush2AQ2QI47 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
Ush2AQ2QI47 Gm4913-201ENSMUST00000117075 1290 ntBASIC9.33□□□□□ -0.92
Ush2AQ2QI47 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Ush2AQ2QI47 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC9.33□□□□□ -0.92
Ush2AQ2QI47 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Ush2AQ2QI47 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Ush2AQ2QI47 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ush2AQ2QI47 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Ush2AQ2QI47 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Ush2AQ2QI47 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC9.33□□□□□ -0.92
Ush2AQ2QI47 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ush2AQ2QI47 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ush2AQ2QI47 Gm25857-201ENSMUST00000082788 129 ntBASIC9.33□□□□□ -0.92
Ush2AQ2QI47 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ush2AQ2QI47 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ush2AQ2QI47 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Ush2AQ2QI47 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ush2AQ2QI47 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC9.33□□□□□ -0.92
Ush2AQ2QI47 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Ush2AQ2QI47 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Ush2AQ2QI47 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Ush2AQ2QI47 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Ush2AQ2QI47 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC9.32□□□□□ -0.92
Ush2AQ2QI47 Mir6420-201ENSMUST00000185032 102 ntBASIC9.32□□□□□ -0.92
Ush2AQ2QI47 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Ush2AQ2QI47 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Ush2AQ2QI47 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Ush2AQ2QI47 Gm12428-201ENSMUST00000119844 727 ntBASIC9.32□□□□□ -0.92
Ush2AQ2QI47 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC9.32□□□□□ -0.92
Ush2AQ2QI47 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Ush2AQ2QI47 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Ush2AQ2QI47 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Ush2AQ2QI47 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Ush2AQ2QI47 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Ush2AQ2QI47 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.92
Ush2AQ2QI47 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Ush2AQ2QI47 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Ush2AQ2QI47 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Ush2AQ2QI47 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Ush2AQ2QI47 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
Ush2AQ2QI47 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC9.32□□□□□ -0.92
Ush2AQ2QI47 Mir3547-201ENSMUST00000175461 88 ntBASIC9.32□□□□□ -0.92
Ush2AQ2QI47 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Ush2AQ2QI47 Gm38319-201ENSMUST00000194537 1266 ntBASIC9.31□□□□□ -0.92
Ush2AQ2QI47 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Ush2AQ2QI47 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Ush2AQ2QI47 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Ush2AQ2QI47 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Ush2AQ2QI47 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC9.31□□□□□ -0.92
Ush2AQ2QI47 Mir8117-201ENSMUST00000184773 107 ntBASIC9.31□□□□□ -0.92
Ush2AQ2QI47 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC9.31□□□□□ -0.92
Ush2AQ2QI47 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Ush2AQ2QI47 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Ush2AQ2QI47 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Ush2AQ2QI47 Gm38345-201ENSMUST00000192635 1748 ntBASIC9.31□□□□□ -0.92
Ush2AQ2QI47 AC125350.2-201ENSMUST00000224737 727 ntBASIC9.31□□□□□ -0.92
Ush2AQ2QI47 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Ush2AQ2QI47 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Ush2AQ2QI47 Gm10355-201ENSMUST00000097146 517 ntBASIC9.31□□□□□ -0.92
Ush2AQ2QI47 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Ush2AQ2QI47 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Ush2AQ2QI47 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Ush2AQ2QI47 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Ush2AQ2QI47 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Ush2AQ2QI47 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC9.31□□□□□ -0.92
Ush2AQ2QI47 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC9.31□□□□□ -0.92
Ush2AQ2QI47 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Ush2AQ2QI47 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Ush2AQ2QI47 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Ush2AQ2QI47 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ush2AQ2QI47 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC9.3□□□□□ -0.92
Ush2AQ2QI47 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ush2AQ2QI47 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Ush2AQ2QI47 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC9.3□□□□□ -0.92
Ush2AQ2QI47 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ush2AQ2QI47 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ush2AQ2QI47 Cdk7-205ENSMUST00000225990 1159 ntBASIC9.3□□□□□ -0.92
Ush2AQ2QI47 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ush2AQ2QI47 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC9.3□□□□□ -0.92
Ush2AQ2QI47 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC9.3□□□□□ -0.92
Ush2AQ2QI47 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC9.3□□□□□ -0.92
Ush2AQ2QI47 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Ush2AQ2QI47 Gm37805-201ENSMUST00000192612 1094 ntBASIC9.3□□□□□ -0.92
Ush2AQ2QI47 Gm44945-201ENSMUST00000206764 1187 ntBASIC9.3□□□□□ -0.92
Ush2AQ2QI47 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ush2AQ2QI47 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Ush2AQ2QI47 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ush2AQ2QI47 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Ush2AQ2QI47 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Ush2AQ2QI47 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ush2AQ2QI47 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC9.3□□□□□ -0.92
Ush2AQ2QI47 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Ush2AQ2QI47 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC9.3□□□□□ -0.92
Ush2AQ2QI47 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC9.3□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms