Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ptchd3Q0EEE2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ptchd3Q0EEE2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ptchd3Q0EEE2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ptchd3Q0EEE2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ptchd3Q0EEE2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ptchd3Q0EEE2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ptchd3Q0EEE2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ptchd3Q0EEE2 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ptchd3Q0EEE2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ptchd3Q0EEE2 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.78■□□□□ 0.28
Ptchd3Q0EEE2 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ptchd3Q0EEE2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Ptchd3Q0EEE2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Ptchd3Q0EEE2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ptchd3Q0EEE2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.78■□□□□ 0.28
Ptchd3Q0EEE2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ptchd3Q0EEE2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ptchd3Q0EEE2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ptchd3Q0EEE2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ptchd3Q0EEE2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ptchd3Q0EEE2 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.78■□□□□ 0.28
Ptchd3Q0EEE2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ptchd3Q0EEE2 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ptchd3Q0EEE2 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.78■□□□□ 0.28
Ptchd3Q0EEE2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Ptchd3Q0EEE2 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.77■□□□□ 0.28
Ptchd3Q0EEE2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.77■□□□□ 0.28
Ptchd3Q0EEE2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ptchd3Q0EEE2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ptchd3Q0EEE2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ptchd3Q0EEE2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ptchd3Q0EEE2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.77■□□□□ 0.28
Ptchd3Q0EEE2 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ptchd3Q0EEE2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ptchd3Q0EEE2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ptchd3Q0EEE2 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Ptchd3Q0EEE2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ptchd3Q0EEE2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ptchd3Q0EEE2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ptchd3Q0EEE2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ptchd3Q0EEE2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ptchd3Q0EEE2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ptchd3Q0EEE2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ptchd3Q0EEE2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ptchd3Q0EEE2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ptchd3Q0EEE2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ptchd3Q0EEE2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ptchd3Q0EEE2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ptchd3Q0EEE2 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ptchd3Q0EEE2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ptchd3Q0EEE2 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ptchd3Q0EEE2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.76■□□□□ 0.27
Ptchd3Q0EEE2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ptchd3Q0EEE2 Gm37179-201ENSMUST00000194862 823 ntBASIC16.76■□□□□ 0.27
Ptchd3Q0EEE2 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ptchd3Q0EEE2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ptchd3Q0EEE2 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ptchd3Q0EEE2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.76■□□□□ 0.27
Ptchd3Q0EEE2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ptchd3Q0EEE2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ptchd3Q0EEE2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ptchd3Q0EEE2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ptchd3Q0EEE2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ptchd3Q0EEE2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Ptchd3Q0EEE2 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.75■□□□□ 0.27
Ptchd3Q0EEE2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ptchd3Q0EEE2 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ptchd3Q0EEE2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ptchd3Q0EEE2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.75■□□□□ 0.27
Ptchd3Q0EEE2 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ptchd3Q0EEE2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.75■□□□□ 0.27
Ptchd3Q0EEE2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ptchd3Q0EEE2 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.75■□□□□ 0.27
Ptchd3Q0EEE2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Ptchd3Q0EEE2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ptchd3Q0EEE2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Ptchd3Q0EEE2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ptchd3Q0EEE2 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ptchd3Q0EEE2 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ptchd3Q0EEE2 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ptchd3Q0EEE2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ptchd3Q0EEE2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ptchd3Q0EEE2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Ptchd3Q0EEE2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ptchd3Q0EEE2 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ptchd3Q0EEE2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ptchd3Q0EEE2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ptchd3Q0EEE2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ptchd3Q0EEE2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ptchd3Q0EEE2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ptchd3Q0EEE2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ptchd3Q0EEE2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ptchd3Q0EEE2 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ptchd3Q0EEE2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ptchd3Q0EEE2 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Ptchd3Q0EEE2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ptchd3Q0EEE2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ptchd3Q0EEE2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ptchd3Q0EEE2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms