Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col10a1Q05306 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col10a1Q05306 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col10a1Q05306 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col10a1Q05306 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col10a1Q05306 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.02■□□□□ 0.15
Col10a1Q05306 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col10a1Q05306 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col10a1Q05306 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Col10a1Q05306 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col10a1Q05306 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.01■□□□□ 0.15
Col10a1Q05306 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col10a1Q05306 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col10a1Q05306 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col10a1Q05306 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col10a1Q05306 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.01■□□□□ 0.15
Col10a1Q05306 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.01■□□□□ 0.15
Col10a1Q05306 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Col10a1Q05306 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col10a1Q05306 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Col10a1Q05306 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col10a1Q05306 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col10a1Q05306 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col10a1Q05306 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col10a1Q05306 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Col10a1Q05306 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col10a1Q05306 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16■□□□□ 0.15
Col10a1Q05306 Gm16042-201ENSMUST00000204813 1247 ntBASIC16■□□□□ 0.15
Col10a1Q05306 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col10a1Q05306 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col10a1Q05306 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col10a1Q05306 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col10a1Q05306 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col10a1Q05306 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col10a1Q05306 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col10a1Q05306 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col10a1Q05306 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col10a1Q05306 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col10a1Q05306 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.99■□□□□ 0.15
Col10a1Q05306 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.99■□□□□ 0.15
Col10a1Q05306 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Col10a1Q05306 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col10a1Q05306 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col10a1Q05306 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col10a1Q05306 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.99■□□□□ 0.15
Col10a1Q05306 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col10a1Q05306 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col10a1Q05306 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col10a1Q05306 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col10a1Q05306 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Col10a1Q05306 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col10a1Q05306 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.98■□□□□ 0.15
Col10a1Q05306 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.98■□□□□ 0.15
Col10a1Q05306 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col10a1Q05306 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Col10a1Q05306 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col10a1Q05306 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col10a1Q05306 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Col10a1Q05306 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Col10a1Q05306 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col10a1Q05306 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col10a1Q05306 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col10a1Q05306 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col10a1Q05306 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col10a1Q05306 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col10a1Q05306 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col10a1Q05306 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col10a1Q05306 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col10a1Q05306 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
Col10a1Q05306 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col10a1Q05306 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col10a1Q05306 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.97■□□□□ 0.15
Col10a1Q05306 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col10a1Q05306 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col10a1Q05306 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.97■□□□□ 0.15
Col10a1Q05306 Gm12085-201ENSMUST00000119263 940 ntBASIC15.97■□□□□ 0.15
Col10a1Q05306 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.97■□□□□ 0.15
Col10a1Q05306 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col10a1Q05306 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col10a1Q05306 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col10a1Q05306 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.97■□□□□ 0.15
Col10a1Q05306 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col10a1Q05306 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col10a1Q05306 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col10a1Q05306 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Col10a1Q05306 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col10a1Q05306 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Col10a1Q05306 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col10a1Q05306 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Col10a1Q05306 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.97■□□□□ 0.15
Col10a1Q05306 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col10a1Q05306 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Col10a1Q05306 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col10a1Q05306 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.96■□□□□ 0.15
Col10a1Q05306 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col10a1Q05306 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.96■□□□□ 0.15
Col10a1Q05306 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col10a1Q05306 Gm8969-201ENSMUST00000199694 526 ntBASIC15.96■□□□□ 0.15
Col10a1Q05306 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col10a1Q05306 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms