Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hist1h3bP84228 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hist1h3bP84228 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hist1h3bP84228 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hist1h3bP84228 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hist1h3bP84228 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.27■□□□□ 0.03
Hist1h3bP84228 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.27■□□□□ 0.03
Hist1h3bP84228 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hist1h3bP84228 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hist1h3bP84228 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hist1h3bP84228 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Hist1h3bP84228 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h3bP84228 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h3bP84228 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h3bP84228 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h3bP84228 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Hist1h3bP84228 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Hist1h3bP84228 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.26■□□□□ 0.03
Hist1h3bP84228 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h3bP84228 Gm6576-201ENSMUST00000169678 883 ntBASIC15.26■□□□□ 0.03
Hist1h3bP84228 Gm18666-201ENSMUST00000190039 958 ntBASIC15.26■□□□□ 0.03
Hist1h3bP84228 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h3bP84228 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h3bP84228 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Hist1h3bP84228 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h3bP84228 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h3bP84228 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h3bP84228 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h3bP84228 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h3bP84228 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hist1h3bP84228 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hist1h3bP84228 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hist1h3bP84228 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Hist1h3bP84228 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Hist1h3bP84228 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hist1h3bP84228 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.25■□□□□ 0.03
Hist1h3bP84228 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hist1h3bP84228 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hist1h3bP84228 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.25■□□□□ 0.03
Hist1h3bP84228 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hist1h3bP84228 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Hist1h3bP84228 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.25■□□□□ 0.03
Hist1h3bP84228 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.25■□□□□ 0.03
Hist1h3bP84228 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.25■□□□□ 0.03
Hist1h3bP84228 Trmt13-210ENSMUST00000198454 880 ntBASIC15.25■□□□□ 0.03
Hist1h3bP84228 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.25■□□□□ 0.03
Hist1h3bP84228 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Hist1h3bP84228 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hist1h3bP84228 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hist1h3bP84228 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hist1h3bP84228 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hist1h3bP84228 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hist1h3bP84228 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hist1h3bP84228 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hist1h3bP84228 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Hist1h3bP84228 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hist1h3bP84228 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.24■□□□□ 0.03
Hist1h3bP84228 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.24■□□□□ 0.03
Hist1h3bP84228 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Hist1h3bP84228 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Hist1h3bP84228 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.24■□□□□ 0.03
Hist1h3bP84228 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hist1h3bP84228 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hist1h3bP84228 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hist1h3bP84228 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.24■□□□□ 0.03
Hist1h3bP84228 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Hist1h3bP84228 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hist1h3bP84228 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Hist1h3bP84228 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.24■□□□□ 0.03
Hist1h3bP84228 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.24■□□□□ 0.03
Hist1h3bP84228 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hist1h3bP84228 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hist1h3bP84228 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hist1h3bP84228 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hist1h3bP84228 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Hist1h3bP84228 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hist1h3bP84228 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hist1h3bP84228 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hist1h3bP84228 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hist1h3bP84228 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hist1h3bP84228 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hist1h3bP84228 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hist1h3bP84228 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.23■□□□□ 0.03
Hist1h3bP84228 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hist1h3bP84228 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hist1h3bP84228 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.23■□□□□ 0.03
Hist1h3bP84228 Gm42545-201ENSMUST00000202755 922 ntBASIC15.23■□□□□ 0.03
Hist1h3bP84228 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.23■□□□□ 0.03
Hist1h3bP84228 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Hist1h3bP84228 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hist1h3bP84228 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hist1h3bP84228 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Hist1h3bP84228 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hist1h3bP84228 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.23■□□□□ 0.03
Hist1h3bP84228 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h3bP84228 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h3bP84228 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h3bP84228 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h3bP84228 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Hist1h3bP84228 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms