Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim4P70271 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.44□□□□□ -0.1
Pdlim4P70271 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim4P70271 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim4P70271 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Pdlim4P70271 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.44□□□□□ -0.1
Pdlim4P70271 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim4P70271 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Pdlim4P70271 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim4P70271 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim4P70271 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim4P70271 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim4P70271 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim4P70271 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim4P70271 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim4P70271 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim4P70271 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Pdlim4P70271 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim4P70271 Gm11643-201ENSMUST00000119578 864 ntBASIC14.43□□□□□ -0.1
Pdlim4P70271 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim4P70271 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim4P70271 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.43□□□□□ -0.1
Pdlim4P70271 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.43□□□□□ -0.1
Pdlim4P70271 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.43□□□□□ -0.1
Pdlim4P70271 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim4P70271 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim4P70271 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim4P70271 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim4P70271 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim4P70271 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim4P70271 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim4P70271 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim4P70271 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim4P70271 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim4P70271 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.42□□□□□ -0.1
Pdlim4P70271 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim4P70271 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim4P70271 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim4P70271 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.42□□□□□ -0.1
Pdlim4P70271 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.42□□□□□ -0.1
Pdlim4P70271 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.42□□□□□ -0.1
Pdlim4P70271 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim4P70271 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim4P70271 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim4P70271 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.42□□□□□ -0.1
Pdlim4P70271 Gm43183-201ENSMUST00000200632 547 ntBASIC14.42□□□□□ -0.1
Pdlim4P70271 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.42□□□□□ -0.1
Pdlim4P70271 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.42□□□□□ -0.1
Pdlim4P70271 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim4P70271 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.42□□□□□ -0.1
Pdlim4P70271 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Pdlim4P70271 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim4P70271 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim4P70271 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim4P70271 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim4P70271 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim4P70271 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim4P70271 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim4P70271 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim4P70271 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Pdlim4P70271 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim4P70271 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim4P70271 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Pdlim4P70271 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.41□□□□□ -0.1
Pdlim4P70271 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim4P70271 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim4P70271 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
Pdlim4P70271 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim4P70271 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim4P70271 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.41□□□□□ -0.1
Pdlim4P70271 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim4P70271 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Pdlim4P70271 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim4P70271 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim4P70271 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim4P70271 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim4P70271 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim4P70271 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim4P70271 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim4P70271 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim4P70271 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.4□□□□□ -0.1
Pdlim4P70271 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim4P70271 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Pdlim4P70271 Idnk-204ENSMUST00000226010 1898 ntBASIC14.4□□□□□ -0.1
Pdlim4P70271 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
Pdlim4P70271 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.4□□□□□ -0.1
Pdlim4P70271 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim4P70271 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Pdlim4P70271 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.4□□□□□ -0.1
Pdlim4P70271 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.4□□□□□ -0.1
Pdlim4P70271 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim4P70271 Gm37292-201ENSMUST00000192062 758 ntBASIC14.4□□□□□ -0.1
Pdlim4P70271 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.4□□□□□ -0.1
Pdlim4P70271 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim4P70271 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim4P70271 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim4P70271 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim4P70271 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.4□□□□□ -0.1
Pdlim4P70271 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Pdlim4P70271 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms