Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Six5P70178 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Six5P70178 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.26■□□□□ 0.19
Six5P70178 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Six5P70178 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six5P70178 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Six5P70178 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six5P70178 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six5P70178 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six5P70178 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six5P70178 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six5P70178 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six5P70178 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six5P70178 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Six5P70178 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six5P70178 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Six5P70178 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six5P70178 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six5P70178 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Six5P70178 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Six5P70178 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six5P70178 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Six5P70178 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.24■□□□□ 0.19
Six5P70178 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six5P70178 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six5P70178 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six5P70178 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six5P70178 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.24■□□□□ 0.19
Six5P70178 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Six5P70178 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six5P70178 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.24■□□□□ 0.19
Six5P70178 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.24■□□□□ 0.19
Six5P70178 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.24■□□□□ 0.19
Six5P70178 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Six5P70178 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six5P70178 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Six5P70178 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six5P70178 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six5P70178 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six5P70178 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six5P70178 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Six5P70178 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six5P70178 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Six5P70178 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.23■□□□□ 0.19
Six5P70178 Mir1199-201ENSMUST00000117015 119 ntBASIC16.23■□□□□ 0.19
Six5P70178 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six5P70178 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.23■□□□□ 0.19
Six5P70178 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.23■□□□□ 0.19
Six5P70178 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six5P70178 Gm10812-201ENSMUST00000099864 546 ntBASIC16.23■□□□□ 0.19
Six5P70178 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Six5P70178 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six5P70178 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six5P70178 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Six5P70178 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.23■□□□□ 0.19
Six5P70178 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six5P70178 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six5P70178 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Six5P70178 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six5P70178 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six5P70178 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Six5P70178 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six5P70178 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six5P70178 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.22■□□□□ 0.19
Six5P70178 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six5P70178 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Six5P70178 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Six5P70178 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Six5P70178 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Six5P70178 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.22■□□□□ 0.19
Six5P70178 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six5P70178 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six5P70178 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six5P70178 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six5P70178 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six5P70178 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six5P70178 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.21■□□□□ 0.19
Six5P70178 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Six5P70178 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.21■□□□□ 0.19
Six5P70178 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Six5P70178 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six5P70178 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.21■□□□□ 0.19
Six5P70178 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six5P70178 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six5P70178 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six5P70178 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six5P70178 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Six5P70178 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.21■□□□□ 0.19
Six5P70178 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.21■□□□□ 0.19
Six5P70178 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.21■□□□□ 0.19
Six5P70178 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Six5P70178 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six5P70178 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.21■□□□□ 0.19
Six5P70178 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.21■□□□□ 0.19
Six5P70178 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six5P70178 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six5P70178 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Six5P70178 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Six5P70178 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six5P70178 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms