Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfn1P62962 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Pfn1P62962 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfn1P62962 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfn1P62962 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfn1P62962 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC13.5□□□□□ -0.25
Pfn1P62962 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfn1P62962 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfn1P62962 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfn1P62962 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pfn1P62962 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfn1P62962 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
Pfn1P62962 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfn1P62962 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfn1P62962 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfn1P62962 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfn1P62962 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Pfn1P62962 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC13.5□□□□□ -0.25
Pfn1P62962 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfn1P62962 Gm38205-201ENSMUST00000192243 258 ntBASIC13.5□□□□□ -0.25
Pfn1P62962 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfn1P62962 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfn1P62962 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfn1P62962 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Pfn1P62962 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfn1P62962 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfn1P62962 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfn1P62962 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfn1P62962 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pfn1P62962 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pfn1P62962 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfn1P62962 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfn1P62962 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pfn1P62962 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pfn1P62962 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pfn1P62962 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfn1P62962 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pfn1P62962 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pfn1P62962 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfn1P62962 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pfn1P62962 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
Pfn1P62962 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pfn1P62962 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pfn1P62962 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfn1P62962 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pfn1P62962 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfn1P62962 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfn1P62962 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfn1P62962 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Pfn1P62962 Gm12821-201ENSMUST00000120022 600 ntBASIC13.49□□□□□ -0.25
Pfn1P62962 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC13.49□□□□□ -0.25
Pfn1P62962 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC13.49□□□□□ -0.25
Pfn1P62962 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pfn1P62962 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC13.49□□□□□ -0.25
Pfn1P62962 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfn1P62962 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfn1P62962 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfn1P62962 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pfn1P62962 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.49□□□□□ -0.25
Pfn1P62962 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfn1P62962 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfn1P62962 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pfn1P62962 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfn1P62962 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pfn1P62962 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfn1P62962 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfn1P62962 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pfn1P62962 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pfn1P62962 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pfn1P62962 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pfn1P62962 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pfn1P62962 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pfn1P62962 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Pfn1P62962 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pfn1P62962 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pfn1P62962 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pfn1P62962 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pfn1P62962 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pfn1P62962 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pfn1P62962 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC13.48□□□□□ -0.25
Pfn1P62962 Gm14281-201ENSMUST00000121700 1294 ntBASIC13.48□□□□□ -0.25
Pfn1P62962 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Pfn1P62962 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pfn1P62962 Gm21956-201ENSMUST00000179946 522 ntBASIC13.48□□□□□ -0.25
Pfn1P62962 Gm26833-201ENSMUST00000180899 440 ntBASIC13.48□□□□□ -0.25
Pfn1P62962 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC13.48□□□□□ -0.25
Pfn1P62962 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pfn1P62962 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pfn1P62962 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Pfn1P62962 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pfn1P62962 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Pfn1P62962 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Pfn1P62962 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pfn1P62962 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pfn1P62962 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pfn1P62962 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC13.48□□□□□ -0.25
Pfn1P62962 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pfn1P62962 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Pfn1P62962 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pfn1P62962 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms