Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sssca1P56873 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.06□□□□□ -0.16
Sssca1P56873 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.06□□□□□ -0.16
Sssca1P56873 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sssca1P56873 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sssca1P56873 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sssca1P56873 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sssca1P56873 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sssca1P56873 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sssca1P56873 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sssca1P56873 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sssca1P56873 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sssca1P56873 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Sssca1P56873 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sssca1P56873 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sssca1P56873 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Sssca1P56873 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sssca1P56873 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sssca1P56873 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Sssca1P56873 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sssca1P56873 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sssca1P56873 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sssca1P56873 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Sssca1P56873 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sssca1P56873 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sssca1P56873 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sssca1P56873 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sssca1P56873 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sssca1P56873 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Sssca1P56873 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sssca1P56873 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sssca1P56873 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sssca1P56873 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sssca1P56873 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sssca1P56873 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sssca1P56873 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sssca1P56873 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sssca1P56873 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sssca1P56873 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sssca1P56873 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sssca1P56873 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sssca1P56873 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sssca1P56873 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sssca1P56873 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sssca1P56873 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sssca1P56873 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.04□□□□□ -0.16
Sssca1P56873 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Sssca1P56873 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sssca1P56873 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Sssca1P56873 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sssca1P56873 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sssca1P56873 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.04□□□□□ -0.16
Sssca1P56873 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sssca1P56873 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.04□□□□□ -0.16
Sssca1P56873 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sssca1P56873 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sssca1P56873 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sssca1P56873 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sssca1P56873 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sssca1P56873 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sssca1P56873 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sssca1P56873 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sssca1P56873 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sssca1P56873 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.04□□□□□ -0.16
Sssca1P56873 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sssca1P56873 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Sssca1P56873 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sssca1P56873 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sssca1P56873 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sssca1P56873 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sssca1P56873 Gm29791-202ENSMUST00000207888 369 ntBASIC14.03□□□□□ -0.16
Sssca1P56873 Gm18671-201ENSMUST00000214826 683 ntBASIC14.03□□□□□ -0.16
Sssca1P56873 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.03□□□□□ -0.16
Sssca1P56873 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sssca1P56873 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sssca1P56873 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sssca1P56873 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sssca1P56873 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sssca1P56873 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sssca1P56873 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Sssca1P56873 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.03□□□□□ -0.16
Sssca1P56873 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sssca1P56873 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sssca1P56873 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sssca1P56873 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.03□□□□□ -0.16
Sssca1P56873 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sssca1P56873 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sssca1P56873 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sssca1P56873 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sssca1P56873 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sssca1P56873 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.02□□□□□ -0.16
Sssca1P56873 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sssca1P56873 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sssca1P56873 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sssca1P56873 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sssca1P56873 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sssca1P56873 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sssca1P56873 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Sssca1P56873 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sssca1P56873 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms