Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.47■□□□□ 0.39
SmoP56726 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SmoP56726 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SmoP56726 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SmoP56726 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SmoP56726 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SmoP56726 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SmoP56726 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SmoP56726 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.47■□□□□ 0.39
SmoP56726 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SmoP56726 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SmoP56726 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SmoP56726 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SmoP56726 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SmoP56726 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SmoP56726 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SmoP56726 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.46■□□□□ 0.39
SmoP56726 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SmoP56726 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SmoP56726 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.46■□□□□ 0.39
SmoP56726 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.46■□□□□ 0.39
SmoP56726 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SmoP56726 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SmoP56726 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SmoP56726 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SmoP56726 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SmoP56726 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SmoP56726 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SmoP56726 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SmoP56726 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SmoP56726 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
SmoP56726 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SmoP56726 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.45■□□□□ 0.38
SmoP56726 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
SmoP56726 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.45■□□□□ 0.38
SmoP56726 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SmoP56726 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.45■□□□□ 0.38
SmoP56726 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SmoP56726 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SmoP56726 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.45■□□□□ 0.38
SmoP56726 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SmoP56726 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.45■□□□□ 0.38
SmoP56726 Gm18959-201ENSMUST00000208954 655 ntBASIC17.45■□□□□ 0.38
SmoP56726 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SmoP56726 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.45■□□□□ 0.38
SmoP56726 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SmoP56726 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SmoP56726 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SmoP56726 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SmoP56726 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SmoP56726 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SmoP56726 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SmoP56726 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SmoP56726 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SmoP56726 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SmoP56726 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SmoP56726 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SmoP56726 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SmoP56726 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
SmoP56726 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SmoP56726 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SmoP56726 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SmoP56726 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SmoP56726 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SmoP56726 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SmoP56726 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SmoP56726 Gm45058-201ENSMUST00000205810 766 ntBASIC17.43■□□□□ 0.38
SmoP56726 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.43■□□□□ 0.38
SmoP56726 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SmoP56726 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SmoP56726 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SmoP56726 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.43■□□□□ 0.38
SmoP56726 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
SmoP56726 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SmoP56726 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SmoP56726 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SmoP56726 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SmoP56726 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SmoP56726 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.42■□□□□ 0.38
SmoP56726 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SmoP56726 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SmoP56726 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.42■□□□□ 0.38
SmoP56726 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SmoP56726 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SmoP56726 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SmoP56726 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SmoP56726 Gm8969-201ENSMUST00000199694 526 ntBASIC17.42■□□□□ 0.38
SmoP56726 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SmoP56726 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SmoP56726 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SmoP56726 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SmoP56726 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.42■□□□□ 0.38
SmoP56726 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SmoP56726 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SmoP56726 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SmoP56726 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.41■□□□□ 0.38
SmoP56726 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SmoP56726 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SmoP56726 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SmoP56726 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms