Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Rrp1P56183 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
Rrp1P56183 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.61■□□□□ 0.73
Rrp1P56183 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rrp1P56183 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rrp1P56183 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rrp1P56183 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rrp1P56183 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rrp1P56183 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rrp1P56183 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.6■□□□□ 0.73
Rrp1P56183 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rrp1P56183 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rrp1P56183 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rrp1P56183 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rrp1P56183 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rrp1P56183 Gm13216-201ENSMUST00000117145 591 ntBASIC19.6■□□□□ 0.73
Rrp1P56183 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rrp1P56183 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rrp1P56183 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rrp1P56183 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rrp1P56183 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rrp1P56183 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Rrp1P56183 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.59■□□□□ 0.73
Rrp1P56183 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.59■□□□□ 0.73
Rrp1P56183 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.59■□□□□ 0.73
Rrp1P56183 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.59■□□□□ 0.73
Rrp1P56183 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rrp1P56183 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rrp1P56183 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rrp1P56183 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.59■□□□□ 0.73
Rrp1P56183 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rrp1P56183 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.59■□□□□ 0.73
Rrp1P56183 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rrp1P56183 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.59■□□□□ 0.73
Rrp1P56183 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Rrp1P56183 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.59■□□□□ 0.73
Rrp1P56183 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.59■□□□□ 0.73
Rrp1P56183 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rrp1P56183 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.59■□□□□ 0.73
Rrp1P56183 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Rrp1P56183 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rrp1P56183 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Rrp1P56183 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rrp1P56183 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rrp1P56183 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.58■□□□□ 0.73
Rrp1P56183 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rrp1P56183 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rrp1P56183 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rrp1P56183 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Rrp1P56183 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rrp1P56183 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.58■□□□□ 0.73
Rrp1P56183 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rrp1P56183 Gm11927-201ENSMUST00000118472 759 ntBASIC19.58■□□□□ 0.72
Rrp1P56183 Gm13148-201ENSMUST00000118892 745 ntBASIC19.58■□□□□ 0.72
Rrp1P56183 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.58■□□□□ 0.72
Rrp1P56183 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rrp1P56183 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rrp1P56183 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rrp1P56183 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rrp1P56183 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rrp1P56183 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rrp1P56183 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rrp1P56183 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rrp1P56183 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Rrp1P56183 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rrp1P56183 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
Rrp1P56183 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.57■□□□□ 0.72
Rrp1P56183 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rrp1P56183 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rrp1P56183 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Rrp1P56183 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rrp1P56183 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rrp1P56183 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rrp1P56183 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.57■□□□□ 0.72
Rrp1P56183 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Rrp1P56183 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Rrp1P56183 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rrp1P56183 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rrp1P56183 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rrp1P56183 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rrp1P56183 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rrp1P56183 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rrp1P56183 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Rrp1P56183 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Rrp1P56183 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Rrp1P56183 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rrp1P56183 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rrp1P56183 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rrp1P56183 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rrp1P56183 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.56■□□□□ 0.72
Rrp1P56183 Rab3c-203ENSMUST00000224180 967 ntBASIC19.56■□□□□ 0.72
Rrp1P56183 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.56■□□□□ 0.72
Rrp1P56183 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rrp1P56183 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Rrp1P56183 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.56■□□□□ 0.72
Rrp1P56183 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rrp1P56183 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rrp1P56183 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rrp1P56183 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rrp1P56183 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms