Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh11P55288 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh11P55288 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh11P55288 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh11P55288 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh11P55288 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Cdh11P55288 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.84■□□□□ 0.13
Cdh11P55288 Gm12896-201ENSMUST00000118430 226 ntBASIC15.84■□□□□ 0.13
Cdh11P55288 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.84■□□□□ 0.13
Cdh11P55288 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh11P55288 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh11P55288 Gm2559-201ENSMUST00000201323 363 ntBASIC15.84■□□□□ 0.13
Cdh11P55288 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh11P55288 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.84■□□□□ 0.13
Cdh11P55288 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh11P55288 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh11P55288 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh11P55288 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh11P55288 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh11P55288 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.84■□□□□ 0.13
Cdh11P55288 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.84■□□□□ 0.13
Cdh11P55288 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh11P55288 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cdh11P55288 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cdh11P55288 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cdh11P55288 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
Cdh11P55288 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cdh11P55288 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Cdh11P55288 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Cdh11P55288 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdh11P55288 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdh11P55288 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdh11P55288 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Cdh11P55288 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Cdh11P55288 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Cdh11P55288 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.83■□□□□ 0.12
Cdh11P55288 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.83■□□□□ 0.12
Cdh11P55288 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.83■□□□□ 0.12
Cdh11P55288 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdh11P55288 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdh11P55288 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdh11P55288 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdh11P55288 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Cdh11P55288 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh11P55288 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.82■□□□□ 0.12
Cdh11P55288 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cdh11P55288 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh11P55288 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.82■□□□□ 0.12
Cdh11P55288 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh11P55288 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh11P55288 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cdh11P55288 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.82■□□□□ 0.12
Cdh11P55288 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.82■□□□□ 0.12
Cdh11P55288 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh11P55288 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh11P55288 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh11P55288 Gm10812-201ENSMUST00000099864 546 ntBASIC15.82■□□□□ 0.12
Cdh11P55288 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh11P55288 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Cdh11P55288 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh11P55288 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh11P55288 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh11P55288 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh11P55288 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh11P55288 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh11P55288 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh11P55288 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh11P55288 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.81■□□□□ 0.12
Cdh11P55288 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh11P55288 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh11P55288 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.81■□□□□ 0.12
Cdh11P55288 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh11P55288 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh11P55288 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh11P55288 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Cdh11P55288 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh11P55288 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh11P55288 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh11P55288 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh11P55288 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.81■□□□□ 0.12
Cdh11P55288 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh11P55288 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh11P55288 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh11P55288 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh11P55288 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh11P55288 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh11P55288 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.8■□□□□ 0.12
Cdh11P55288 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cdh11P55288 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh11P55288 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh11P55288 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh11P55288 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Cdh11P55288 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh11P55288 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cdh11P55288 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh11P55288 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh11P55288 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh11P55288 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cdh11P55288 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh11P55288 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms