Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdkn2bP55271 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdkn2bP55271 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cdkn2bP55271 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.67■□□□□ 0.26
Cdkn2bP55271 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdkn2bP55271 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Cdkn2bP55271 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdkn2bP55271 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdkn2bP55271 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdkn2bP55271 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdkn2bP55271 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cdkn2bP55271 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdkn2bP55271 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdkn2bP55271 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Cdkn2bP55271 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cdkn2bP55271 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdkn2bP55271 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdkn2bP55271 Rab3c-203ENSMUST00000224180 967 ntBASIC16.66■□□□□ 0.26
Cdkn2bP55271 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdkn2bP55271 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdkn2bP55271 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Cdkn2bP55271 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdkn2bP55271 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cdkn2bP55271 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.66■□□□□ 0.26
Cdkn2bP55271 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdkn2bP55271 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdkn2bP55271 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Cdkn2bP55271 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdkn2bP55271 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cdkn2bP55271 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdkn2bP55271 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdkn2bP55271 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdkn2bP55271 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.65■□□□□ 0.26
Cdkn2bP55271 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Cdkn2bP55271 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.65■□□□□ 0.26
Cdkn2bP55271 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.65■□□□□ 0.26
Cdkn2bP55271 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cdkn2bP55271 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.65■□□□□ 0.26
Cdkn2bP55271 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdkn2bP55271 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cdkn2bP55271 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdkn2bP55271 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.65■□□□□ 0.26
Cdkn2bP55271 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdkn2bP55271 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cdkn2bP55271 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Cdkn2bP55271 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdkn2bP55271 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.64■□□□□ 0.25
Cdkn2bP55271 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.64■□□□□ 0.25
Cdkn2bP55271 Gm11643-201ENSMUST00000119578 864 ntBASIC16.64■□□□□ 0.25
Cdkn2bP55271 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.64■□□□□ 0.25
Cdkn2bP55271 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdkn2bP55271 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cdkn2bP55271 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cdkn2bP55271 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cdkn2bP55271 Mtag2-201ENSMUST00000058665 714 ntBASIC16.64■□□□□ 0.25
Cdkn2bP55271 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.64■□□□□ 0.25
Cdkn2bP55271 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdkn2bP55271 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cdkn2bP55271 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdkn2bP55271 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdkn2bP55271 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cdkn2bP55271 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cdkn2bP55271 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cdkn2bP55271 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cdkn2bP55271 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Cdkn2bP55271 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cdkn2bP55271 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cdkn2bP55271 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.63■□□□□ 0.25
Cdkn2bP55271 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdkn2bP55271 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdkn2bP55271 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdkn2bP55271 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdkn2bP55271 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdkn2bP55271 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cdkn2bP55271 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdkn2bP55271 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Cdkn2bP55271 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkn2bP55271 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Cdkn2bP55271 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkn2bP55271 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkn2bP55271 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkn2bP55271 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.62■□□□□ 0.25
Cdkn2bP55271 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkn2bP55271 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.62■□□□□ 0.25
Cdkn2bP55271 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cdkn2bP55271 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkn2bP55271 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Cdkn2bP55271 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkn2bP55271 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkn2bP55271 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.62■□□□□ 0.25
Cdkn2bP55271 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.62■□□□□ 0.25
Cdkn2bP55271 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkn2bP55271 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.62■□□□□ 0.25
Cdkn2bP55271 Mir6349-201ENSMUST00000184059 97 ntBASIC16.62■□□□□ 0.25
Cdkn2bP55271 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.62■□□□□ 0.25
Cdkn2bP55271 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkn2bP55271 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cdkn2bP55271 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkn2bP55271 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.62■□□□□ 0.25
Cdkn2bP55271 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms