Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx6P54823 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx6P54823 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx6P54823 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx6P54823 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx6P54823 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx6P54823 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx6P54823 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Ddx6P54823 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.67■□□□□ 0.42
Ddx6P54823 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx6P54823 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx6P54823 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx6P54823 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx6P54823 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx6P54823 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx6P54823 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx6P54823 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx6P54823 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Ddx6P54823 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx6P54823 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx6P54823 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx6P54823 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx6P54823 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.67■□□□□ 0.42
Ddx6P54823 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx6P54823 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx6P54823 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx6P54823 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx6P54823 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx6P54823 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx6P54823 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx6P54823 Gm7284-201ENSMUST00000131667 944 ntBASIC17.66■□□□□ 0.42
Ddx6P54823 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx6P54823 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx6P54823 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx6P54823 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx6P54823 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ddx6P54823 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx6P54823 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx6P54823 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx6P54823 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx6P54823 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx6P54823 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx6P54823 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.65■□□□□ 0.42
Ddx6P54823 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx6P54823 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx6P54823 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx6P54823 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx6P54823 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
Ddx6P54823 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx6P54823 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ddx6P54823 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ddx6P54823 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx6P54823 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx6P54823 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx6P54823 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx6P54823 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ddx6P54823 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ddx6P54823 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Ddx6P54823 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx6P54823 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx6P54823 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx6P54823 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.64■□□□□ 0.41
Ddx6P54823 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx6P54823 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx6P54823 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ddx6P54823 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx6P54823 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.64■□□□□ 0.41
Ddx6P54823 Gm29518-201ENSMUST00000190858 372 ntBASIC17.64■□□□□ 0.41
Ddx6P54823 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ddx6P54823 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx6P54823 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.64■□□□□ 0.41
Ddx6P54823 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.64■□□□□ 0.41
Ddx6P54823 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx6P54823 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx6P54823 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ddx6P54823 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx6P54823 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx6P54823 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Ddx6P54823 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx6P54823 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.63■□□□□ 0.41
Ddx6P54823 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx6P54823 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx6P54823 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ddx6P54823 Actl10-202ENSMUST00000226583 1501 ntBASIC17.63■□□□□ 0.41
Ddx6P54823 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx6P54823 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.63■□□□□ 0.41
Ddx6P54823 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.63■□□□□ 0.41
Ddx6P54823 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx6P54823 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ddx6P54823 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Ddx6P54823 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx6P54823 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx6P54823 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Ddx6P54823 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx6P54823 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx6P54823 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx6P54823 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ddx6P54823 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Ddx6P54823 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx6P54823 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms