Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm44359-201ENSMUST00000200671 138 ntBASIC17.76■□□□□ 0.43
Sox1P53783 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.76■□□□□ 0.43
Sox1P53783 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox1P53783 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.76■□□□□ 0.43
Sox1P53783 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.76■□□□□ 0.43
Sox1P53783 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox1P53783 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox1P53783 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox1P53783 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox1P53783 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.76■□□□□ 0.43
Sox1P53783 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox1P53783 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Sox1P53783 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Sox1P53783 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sox1P53783 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sox1P53783 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sox1P53783 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.75■□□□□ 0.43
Sox1P53783 Gm37025-201ENSMUST00000195159 829 ntBASIC17.75■□□□□ 0.43
Sox1P53783 Gm10175-201ENSMUST00000086013 645 ntBASIC17.75■□□□□ 0.43
Sox1P53783 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sox1P53783 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sox1P53783 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.75■□□□□ 0.43
Sox1P53783 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sox1P53783 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.75■□□□□ 0.43
Sox1P53783 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Sox1P53783 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sox1P53783 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.74■□□□□ 0.43
Sox1P53783 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Sox1P53783 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.74■□□□□ 0.43
Sox1P53783 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.74■□□□□ 0.43
Sox1P53783 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sox1P53783 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.74■□□□□ 0.43
Sox1P53783 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.74■□□□□ 0.43
Sox1P53783 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Sox1P53783 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.74■□□□□ 0.43
Sox1P53783 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.74■□□□□ 0.43
Sox1P53783 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.74■□□□□ 0.43
Sox1P53783 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sox1P53783 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sox1P53783 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Sox1P53783 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sox1P53783 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sox1P53783 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sox1P53783 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sox1P53783 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Sox1P53783 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Sox1P53783 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sox1P53783 Gm14494-201ENSMUST00000118786 435 ntBASIC17.73■□□□□ 0.43
Sox1P53783 Gm12260-201ENSMUST00000122447 411 ntBASIC17.73■□□□□ 0.43
Sox1P53783 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sox1P53783 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sox1P53783 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sox1P53783 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sox1P53783 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox1P53783 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox1P53783 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sox1P53783 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox1P53783 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox1P53783 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Sox1P53783 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sox1P53783 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox1P53783 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.72■□□□□ 0.43
Sox1P53783 Mir5126-201ENSMUST00000175513 77 ntBASIC17.72■□□□□ 0.43
Sox1P53783 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Sox1P53783 Psmb5-202ENSMUST00000227257 622 ntBASIC17.72■□□□□ 0.43
Sox1P53783 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Sox1P53783 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox1P53783 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox1P53783 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox1P53783 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sox1P53783 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sox1P53783 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sox1P53783 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox1P53783 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox1P53783 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox1P53783 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox1P53783 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.71■□□□□ 0.43
Sox1P53783 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.71■□□□□ 0.43
Sox1P53783 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox1P53783 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox1P53783 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox1P53783 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox1P53783 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Sox1P53783 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox1P53783 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Sox1P53783 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox1P53783 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sox1P53783 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sox1P53783 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Sox1P53783 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Sox1P53783 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.7■□□□□ 0.42
Sox1P53783 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sox1P53783 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.7■□□□□ 0.42
Sox1P53783 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox1P53783 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox1P53783 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sox1P53783 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Sox1P53783 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.7■□□□□ 0.42
Sox1P53783 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.7■□□□□ 0.42
Sox1P53783 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms