Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Pdx1P52946 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pdx1P52946 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pdx1P52946 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pdx1P52946 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdx1P52946 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdx1P52946 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdx1P52946 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Pdx1P52946 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdx1P52946 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdx1P52946 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pdx1P52946 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdx1P52946 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdx1P52946 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdx1P52946 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdx1P52946 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdx1P52946 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdx1P52946 Gm24841-201ENSMUST00000158676 357 ntBASIC17.17■□□□□ 0.34
Pdx1P52946 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Pdx1P52946 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pdx1P52946 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pdx1P52946 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pdx1P52946 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pdx1P52946 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdx1P52946 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdx1P52946 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdx1P52946 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pdx1P52946 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdx1P52946 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.17■□□□□ 0.34
Pdx1P52946 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdx1P52946 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdx1P52946 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pdx1P52946 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdx1P52946 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdx1P52946 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdx1P52946 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pdx1P52946 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pdx1P52946 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pdx1P52946 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pdx1P52946 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.16■□□□□ 0.34
Pdx1P52946 Gm12085-201ENSMUST00000119263 940 ntBASIC17.16■□□□□ 0.34
Pdx1P52946 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pdx1P52946 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pdx1P52946 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Pdx1P52946 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Pdx1P52946 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pdx1P52946 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pdx1P52946 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.16■□□□□ 0.34
Pdx1P52946 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pdx1P52946 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pdx1P52946 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pdx1P52946 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pdx1P52946 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdx1P52946 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdx1P52946 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdx1P52946 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.15■□□□□ 0.34
Pdx1P52946 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdx1P52946 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdx1P52946 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdx1P52946 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pdx1P52946 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdx1P52946 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.15■□□□□ 0.34
Pdx1P52946 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pdx1P52946 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdx1P52946 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdx1P52946 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdx1P52946 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pdx1P52946 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.14■□□□□ 0.34
Pdx1P52946 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pdx1P52946 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.14■□□□□ 0.34
Pdx1P52946 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pdx1P52946 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pdx1P52946 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pdx1P52946 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Pdx1P52946 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.14■□□□□ 0.33
Pdx1P52946 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.14■□□□□ 0.33
Pdx1P52946 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.14■□□□□ 0.33
Pdx1P52946 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pdx1P52946 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.14■□□□□ 0.33
Pdx1P52946 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pdx1P52946 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pdx1P52946 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pdx1P52946 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pdx1P52946 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pdx1P52946 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pdx1P52946 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pdx1P52946 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pdx1P52946 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pdx1P52946 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pdx1P52946 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pdx1P52946 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.13■□□□□ 0.33
Pdx1P52946 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pdx1P52946 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pdx1P52946 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pdx1P52946 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pdx1P52946 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pdx1P52946 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pdx1P52946 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pdx1P52946 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pdx1P52946 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms