Protein–RNA interactions for Protein: P49194

Rbp3, Retinol-binding protein 3, mousemouse

Predictions only

Length 1,234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbp3P49194 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rbp3P49194 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rbp3P49194 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rbp3P49194 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rbp3P49194 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rbp3P49194 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rbp3P49194 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.27■□□□□ 0.68
Rbp3P49194 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rbp3P49194 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.27■□□□□ 0.68
Rbp3P49194 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rbp3P49194 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rbp3P49194 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rbp3P49194 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.27■□□□□ 0.68
Rbp3P49194 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rbp3P49194 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.67
Rbp3P49194 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
Rbp3P49194 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Rbp3P49194 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rbp3P49194 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rbp3P49194 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rbp3P49194 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rbp3P49194 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rbp3P49194 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rbp3P49194 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Rbp3P49194 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rbp3P49194 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rbp3P49194 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.26■□□□□ 0.67
Rbp3P49194 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rbp3P49194 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rbp3P49194 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.26■□□□□ 0.67
Rbp3P49194 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.26■□□□□ 0.67
Rbp3P49194 Gm26039-201ENSMUST00000158152 144 ntBASIC19.26■□□□□ 0.67
Rbp3P49194 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rbp3P49194 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rbp3P49194 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rbp3P49194 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.26■□□□□ 0.67
Rbp3P49194 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Rbp3P49194 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.25■□□□□ 0.67
Rbp3P49194 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rbp3P49194 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Rbp3P49194 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rbp3P49194 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Rbp3P49194 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rbp3P49194 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rbp3P49194 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.25■□□□□ 0.67
Rbp3P49194 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rbp3P49194 Gm28033-201ENSMUST00000184224 96 ntBASIC19.25■□□□□ 0.67
Rbp3P49194 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rbp3P49194 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.25■□□□□ 0.67
Rbp3P49194 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rbp3P49194 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Rbp3P49194 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rbp3P49194 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Rbp3P49194 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rbp3P49194 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rbp3P49194 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rbp3P49194 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rbp3P49194 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rbp3P49194 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Rbp3P49194 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rbp3P49194 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Rbp3P49194 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Rbp3P49194 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.24■□□□□ 0.67
Rbp3P49194 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rbp3P49194 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rbp3P49194 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rbp3P49194 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rbp3P49194 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rbp3P49194 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rbp3P49194 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Rbp3P49194 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rbp3P49194 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rbp3P49194 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rbp3P49194 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Rbp3P49194 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Rbp3P49194 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.23■□□□□ 0.67
Rbp3P49194 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Rbp3P49194 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rbp3P49194 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rbp3P49194 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rbp3P49194 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rbp3P49194 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rbp3P49194 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rbp3P49194 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Rbp3P49194 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rbp3P49194 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rbp3P49194 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rbp3P49194 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rbp3P49194 Gm11950-201ENSMUST00000121615 838 ntBASIC19.22■□□□□ 0.67
Rbp3P49194 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rbp3P49194 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.22■□□□□ 0.67
Rbp3P49194 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.22■□□□□ 0.67
Rbp3P49194 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.22■□□□□ 0.67
Rbp3P49194 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rbp3P49194 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rbp3P49194 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rbp3P49194 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.22■□□□□ 0.67
Rbp3P49194 Gm10566-201ENSMUST00000086739 996 ntBASIC19.22■□□□□ 0.67
Rbp3P49194 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rbp3P49194 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms