Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx2-6P43688 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx2-6P43688 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx2-6P43688 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx2-6P43688 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-6P43688 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-6P43688 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-6P43688 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.41■□□□□ 0.22
Nkx2-6P43688 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.41■□□□□ 0.22
Nkx2-6P43688 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-6P43688 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-6P43688 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-6P43688 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-6P43688 Gm6345-202ENSMUST00000180900 204 ntBASIC16.41■□□□□ 0.22
Nkx2-6P43688 Il3ra-202ENSMUST00000223589 738 ntBASIC16.41■□□□□ 0.22
Nkx2-6P43688 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-6P43688 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.41■□□□□ 0.22
Nkx2-6P43688 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-6P43688 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-6P43688 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-6P43688 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-6P43688 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx2-6P43688 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
Nkx2-6P43688 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-6P43688 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-6P43688 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.4■□□□□ 0.22
Nkx2-6P43688 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-6P43688 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-6P43688 Gm22697-201ENSMUST00000175194 63 ntBASIC16.4■□□□□ 0.22
Nkx2-6P43688 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.4■□□□□ 0.22
Nkx2-6P43688 Gm7791-201ENSMUST00000219066 539 ntBASIC16.4■□□□□ 0.22
Nkx2-6P43688 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Nkx2-6P43688 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-6P43688 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-6P43688 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.4■□□□□ 0.22
Nkx2-6P43688 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.4■□□□□ 0.22
Nkx2-6P43688 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-6P43688 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Nkx2-6P43688 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-6P43688 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-6P43688 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-6P43688 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx2-6P43688 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-6P43688 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Nkx2-6P43688 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-6P43688 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.39■□□□□ 0.21
Nkx2-6P43688 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-6P43688 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Nkx2-6P43688 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-6P43688 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Nkx2-6P43688 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-6P43688 Gm37025-201ENSMUST00000195159 829 ntBASIC16.39■□□□□ 0.21
Nkx2-6P43688 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Nkx2-6P43688 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Nkx2-6P43688 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-6P43688 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-6P43688 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-6P43688 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-6P43688 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Nkx2-6P43688 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-6P43688 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-6P43688 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx2-6P43688 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-6P43688 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-6P43688 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-6P43688 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-6P43688 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-6P43688 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Nkx2-6P43688 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.38■□□□□ 0.21
Nkx2-6P43688 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Nkx2-6P43688 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.38■□□□□ 0.21
Nkx2-6P43688 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-6P43688 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-6P43688 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-6P43688 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Nkx2-6P43688 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-6P43688 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-6P43688 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
Nkx2-6P43688 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-6P43688 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-6P43688 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-6P43688 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-6P43688 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-6P43688 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Nkx2-6P43688 Gm33142-201ENSMUST00000193913 867 ntBASIC16.37■□□□□ 0.21
Nkx2-6P43688 Gm9731-201ENSMUST00000209480 747 ntBASIC16.37■□□□□ 0.21
Nkx2-6P43688 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-6P43688 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.37■□□□□ 0.21
Nkx2-6P43688 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-6P43688 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-6P43688 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-6P43688 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-6P43688 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-6P43688 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
Nkx2-6P43688 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Nkx2-6P43688 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-6P43688 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-6P43688 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-6P43688 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-6P43688 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms