Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.65■□□□□ 0.58
HttP42859 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
HttP42859 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
HttP42859 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.64■□□□□ 0.58
HttP42859 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HttP42859 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HttP42859 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HttP42859 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.64■□□□□ 0.57
HttP42859 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.64■□□□□ 0.57
HttP42859 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.64■□□□□ 0.57
HttP42859 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
HttP42859 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HttP42859 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.64■□□□□ 0.57
HttP42859 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HttP42859 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HttP42859 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HttP42859 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HttP42859 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.63■□□□□ 0.57
HttP42859 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.63■□□□□ 0.57
HttP42859 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
HttP42859 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
HttP42859 Gm13127-201ENSMUST00000118978 1389 ntBASIC18.63■□□□□ 0.57
HttP42859 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.63■□□□□ 0.57
HttP42859 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HttP42859 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HttP42859 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
HttP42859 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.63■□□□□ 0.57
HttP42859 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HttP42859 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HttP42859 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HttP42859 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HttP42859 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HttP42859 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.63■□□□□ 0.57
HttP42859 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.63■□□□□ 0.57
HttP42859 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HttP42859 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HttP42859 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HttP42859 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HttP42859 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
HttP42859 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HttP42859 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HttP42859 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC18.62■□□□□ 0.57
HttP42859 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HttP42859 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.62■□□□□ 0.57
HttP42859 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.62■□□□□ 0.57
HttP42859 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.62■□□□□ 0.57
HttP42859 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.62■□□□□ 0.57
HttP42859 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HttP42859 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC18.61■□□□□ 0.57
HttP42859 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HttP42859 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HttP42859 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HttP42859 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.61■□□□□ 0.57
HttP42859 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.61■□□□□ 0.57
HttP42859 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.61■□□□□ 0.57
HttP42859 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HttP42859 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HttP42859 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HttP42859 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.61■□□□□ 0.57
HttP42859 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.61■□□□□ 0.57
HttP42859 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.61■□□□□ 0.57
HttP42859 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HttP42859 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HttP42859 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HttP42859 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.6■□□□□ 0.57
HttP42859 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
HttP42859 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.6■□□□□ 0.57
HttP42859 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HttP42859 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HttP42859 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HttP42859 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HttP42859 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.6■□□□□ 0.57
HttP42859 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HttP42859 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
HttP42859 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
HttP42859 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HttP42859 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HttP42859 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HttP42859 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HttP42859 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HttP42859 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC18.59■□□□□ 0.57
HttP42859 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HttP42859 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HttP42859 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HttP42859 Gm27867-201ENSMUST00000184778 125 ntBASIC18.59■□□□□ 0.57
HttP42859 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HttP42859 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HttP42859 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HttP42859 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HttP42859 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HttP42859 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HttP42859 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.59■□□□□ 0.57
HttP42859 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HttP42859 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
HttP42859 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HttP42859 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.58■□□□□ 0.57
HttP42859 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HttP42859 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HttP42859 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.58■□□□□ 0.56
HttP42859 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms