Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox5P35710 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.99■□□□□ 0.63
Sox5P35710 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.99■□□□□ 0.63
Sox5P35710 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox5P35710 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox5P35710 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox5P35710 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox5P35710 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox5P35710 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox5P35710 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox5P35710 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox5P35710 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox5P35710 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox5P35710 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox5P35710 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Sox5P35710 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox5P35710 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Sox5P35710 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sox5P35710 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Sox5P35710 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox5P35710 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Sox5P35710 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Sox5P35710 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox5P35710 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox5P35710 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox5P35710 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.97■□□□□ 0.63
Sox5P35710 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.97■□□□□ 0.63
Sox5P35710 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox5P35710 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox5P35710 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sox5P35710 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox5P35710 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox5P35710 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Sox5P35710 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox5P35710 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox5P35710 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sox5P35710 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox5P35710 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox5P35710 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox5P35710 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox5P35710 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox5P35710 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Sox5P35710 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox5P35710 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.96■□□□□ 0.63
Sox5P35710 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sox5P35710 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox5P35710 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.96■□□□□ 0.63
Sox5P35710 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox5P35710 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Sox5P35710 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sox5P35710 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox5P35710 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox5P35710 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox5P35710 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.96■□□□□ 0.63
Sox5P35710 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Sox5P35710 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Sox5P35710 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox5P35710 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox5P35710 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox5P35710 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox5P35710 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox5P35710 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox5P35710 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sox5P35710 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.95■□□□□ 0.62
Sox5P35710 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sox5P35710 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.95■□□□□ 0.62
Sox5P35710 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Sox5P35710 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox5P35710 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox5P35710 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Sox5P35710 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox5P35710 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Sox5P35710 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Sox5P35710 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox5P35710 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sox5P35710 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.94■□□□□ 0.62
Sox5P35710 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox5P35710 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox5P35710 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sox5P35710 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Sox5P35710 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sox5P35710 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox5P35710 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Sox5P35710 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sox5P35710 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.94■□□□□ 0.62
Sox5P35710 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox5P35710 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.93■□□□□ 0.62
Sox5P35710 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Sox5P35710 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Sox5P35710 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.93■□□□□ 0.62
Sox5P35710 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox5P35710 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.93■□□□□ 0.62
Sox5P35710 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox5P35710 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.93■□□□□ 0.62
Sox5P35710 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sox5P35710 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox5P35710 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox5P35710 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Sox5P35710 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox5P35710 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms