Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Foxa1P35582 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Foxa1P35582 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Foxa1P35582 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
Foxa1P35582 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Foxa1P35582 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Foxa1P35582 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Foxa1P35582 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Foxa1P35582 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Foxa1P35582 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Foxa1P35582 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.06■□□□□ 0.16
Foxa1P35582 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Foxa1P35582 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.06■□□□□ 0.16
Foxa1P35582 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Foxa1P35582 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Foxa1P35582 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Foxa1P35582 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Foxa1P35582 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Foxa1P35582 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Foxa1P35582 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Foxa1P35582 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.06■□□□□ 0.16
Foxa1P35582 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.06■□□□□ 0.16
Foxa1P35582 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Foxa1P35582 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.06■□□□□ 0.16
Foxa1P35582 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Foxa1P35582 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Foxa1P35582 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Foxa1P35582 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Foxa1P35582 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Foxa1P35582 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Foxa1P35582 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Foxa1P35582 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Foxa1P35582 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Foxa1P35582 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Foxa1P35582 Gm12085-201ENSMUST00000119263 940 ntBASIC16.05■□□□□ 0.16
Foxa1P35582 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Foxa1P35582 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Foxa1P35582 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Foxa1P35582 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Foxa1P35582 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Foxa1P35582 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Foxa1P35582 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Foxa1P35582 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Foxa1P35582 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.05■□□□□ 0.16
Foxa1P35582 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Foxa1P35582 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Foxa1P35582 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Foxa1P35582 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Foxa1P35582 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Foxa1P35582 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Foxa1P35582 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Foxa1P35582 Gm24841-201ENSMUST00000158676 357 ntBASIC16.04■□□□□ 0.16
Foxa1P35582 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Foxa1P35582 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Foxa1P35582 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.04■□□□□ 0.16
Foxa1P35582 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.04■□□□□ 0.16
Foxa1P35582 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.04■□□□□ 0.16
Foxa1P35582 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Foxa1P35582 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Foxa1P35582 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Foxa1P35582 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Foxa1P35582 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Foxa1P35582 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Foxa1P35582 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Foxa1P35582 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Foxa1P35582 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Foxa1P35582 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Foxa1P35582 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Foxa1P35582 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.03■□□□□ 0.16
Foxa1P35582 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Foxa1P35582 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.03■□□□□ 0.16
Foxa1P35582 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Foxa1P35582 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Foxa1P35582 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Foxa1P35582 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.03■□□□□ 0.16
Foxa1P35582 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Foxa1P35582 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Foxa1P35582 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Foxa1P35582 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.03■□□□□ 0.16
Foxa1P35582 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Foxa1P35582 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Foxa1P35582 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.03■□□□□ 0.16
Foxa1P35582 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Foxa1P35582 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Foxa1P35582 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Foxa1P35582 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Foxa1P35582 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Foxa1P35582 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Foxa1P35582 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Foxa1P35582 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.02■□□□□ 0.16
Foxa1P35582 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Foxa1P35582 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.02■□□□□ 0.16
Foxa1P35582 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Foxa1P35582 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Foxa1P35582 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.02■□□□□ 0.16
Foxa1P35582 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.02■□□□□ 0.16
Foxa1P35582 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Foxa1P35582 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Foxa1P35582 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
Foxa1P35582 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms