Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Rab5cP35278 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab5cP35278 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab5cP35278 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Rab5cP35278 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab5cP35278 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.22□□□□□ -0.13
Rab5cP35278 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab5cP35278 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rab5cP35278 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.22□□□□□ -0.13
Rab5cP35278 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab5cP35278 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Rab5cP35278 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Rab5cP35278 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab5cP35278 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab5cP35278 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rab5cP35278 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab5cP35278 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.22□□□□□ -0.13
Rab5cP35278 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rab5cP35278 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab5cP35278 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab5cP35278 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab5cP35278 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rab5cP35278 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab5cP35278 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab5cP35278 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab5cP35278 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab5cP35278 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rab5cP35278 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC14.21□□□□□ -0.13
Rab5cP35278 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rab5cP35278 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rab5cP35278 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Rab5cP35278 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab5cP35278 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab5cP35278 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rab5cP35278 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab5cP35278 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.21□□□□□ -0.14
Rab5cP35278 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rab5cP35278 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.21□□□□□ -0.14
Rab5cP35278 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rab5cP35278 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab5cP35278 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab5cP35278 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab5cP35278 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab5cP35278 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.2□□□□□ -0.14
Rab5cP35278 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rab5cP35278 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Rab5cP35278 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab5cP35278 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC14.2□□□□□ -0.14
Rab5cP35278 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Rab5cP35278 Mir6538-201ENSMUST00000183713 110 ntBASIC14.2□□□□□ -0.14
Rab5cP35278 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC14.2□□□□□ -0.14
Rab5cP35278 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rab5cP35278 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rab5cP35278 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rab5cP35278 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab5cP35278 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rab5cP35278 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Rab5cP35278 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab5cP35278 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rab5cP35278 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab5cP35278 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab5cP35278 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rab5cP35278 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rab5cP35278 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.2□□□□□ -0.14
Rab5cP35278 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab5cP35278 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rab5cP35278 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rab5cP35278 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab5cP35278 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rab5cP35278 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab5cP35278 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.19□□□□□ -0.14
Rab5cP35278 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.19□□□□□ -0.14
Rab5cP35278 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab5cP35278 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab5cP35278 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab5cP35278 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rab5cP35278 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rab5cP35278 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.19□□□□□ -0.14
Rab5cP35278 Gm7417-201ENSMUST00000192950 473 ntBASIC14.19□□□□□ -0.14
Rab5cP35278 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC14.19□□□□□ -0.14
Rab5cP35278 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab5cP35278 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab5cP35278 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab5cP35278 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab5cP35278 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab5cP35278 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab5cP35278 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab5cP35278 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.19□□□□□ -0.14
Rab5cP35278 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab5cP35278 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rab5cP35278 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rab5cP35278 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab5cP35278 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Rab5cP35278 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab5cP35278 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rab5cP35278 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab5cP35278 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rab5cP35278 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rab5cP35278 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab5cP35278 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms