Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc6a1P31648 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.95□□□□□ -0.02
Slc6a1P31648 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc6a1P31648 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Slc6a1P31648 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc6a1P31648 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc6a1P31648 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc6a1P31648 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.95□□□□□ -0.02
Slc6a1P31648 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slc6a1P31648 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
Slc6a1P31648 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slc6a1P31648 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Slc6a1P31648 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
Slc6a1P31648 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slc6a1P31648 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slc6a1P31648 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slc6a1P31648 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Slc6a1P31648 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.94□□□□□ -0.02
Slc6a1P31648 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slc6a1P31648 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slc6a1P31648 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14.94□□□□□ -0.02
Slc6a1P31648 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slc6a1P31648 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slc6a1P31648 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slc6a1P31648 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slc6a1P31648 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slc6a1P31648 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slc6a1P31648 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc6a1P31648 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc6a1P31648 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Slc6a1P31648 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Slc6a1P31648 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Slc6a1P31648 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.93□□□□□ -0.02
Slc6a1P31648 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc6a1P31648 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Slc6a1P31648 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc6a1P31648 Gm9988-201ENSMUST00000069786 435 ntBASIC14.93□□□□□ -0.02
Slc6a1P31648 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc6a1P31648 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc6a1P31648 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc6a1P31648 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc6a1P31648 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Slc6a1P31648 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc6a1P31648 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Slc6a1P31648 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Slc6a1P31648 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc6a1P31648 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Slc6a1P31648 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a1P31648 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a1P31648 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.92□□□□□ -0.02
Slc6a1P31648 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a1P31648 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Slc6a1P31648 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a1P31648 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a1P31648 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a1P31648 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a1P31648 Gm13234-201ENSMUST00000120010 747 ntBASIC14.92□□□□□ -0.02
Slc6a1P31648 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a1P31648 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a1P31648 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.92□□□□□ -0.02
Slc6a1P31648 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a1P31648 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a1P31648 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a1P31648 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a1P31648 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a1P31648 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a1P31648 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a1P31648 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a1P31648 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a1P31648 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.92□□□□□ -0.02
Slc6a1P31648 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a1P31648 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a1P31648 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a1P31648 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a1P31648 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Slc6a1P31648 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Slc6a1P31648 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Slc6a1P31648 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Slc6a1P31648 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Slc6a1P31648 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Slc6a1P31648 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Slc6a1P31648 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.91□□□□□ -0.02
Slc6a1P31648 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.91□□□□□ -0.02
Slc6a1P31648 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.91□□□□□ -0.02
Slc6a1P31648 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Slc6a1P31648 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Slc6a1P31648 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Slc6a1P31648 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.91□□□□□ -0.02
Slc6a1P31648 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.91□□□□□ -0.02
Slc6a1P31648 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Slc6a1P31648 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Slc6a1P31648 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Slc6a1P31648 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Slc6a1P31648 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Slc6a1P31648 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Slc6a1P31648 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Slc6a1P31648 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.9□□□□□ -0.02
Slc6a1P31648 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Slc6a1P31648 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Slc6a1P31648 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms