Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nckap1P28660 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nckap1P28660 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nckap1P28660 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Nckap1P28660 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nckap1P28660 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nckap1P28660 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nckap1P28660 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nckap1P28660 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nckap1P28660 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Nckap1P28660 Gm9731-201ENSMUST00000209480 747 ntBASIC17.27■□□□□ 0.36
Nckap1P28660 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nckap1P28660 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nckap1P28660 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nckap1P28660 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nckap1P28660 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nckap1P28660 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nckap1P28660 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nckap1P28660 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nckap1P28660 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.26■□□□□ 0.35
Nckap1P28660 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nckap1P28660 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nckap1P28660 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nckap1P28660 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Nckap1P28660 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nckap1P28660 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nckap1P28660 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Nckap1P28660 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nckap1P28660 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nckap1P28660 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Nckap1P28660 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nckap1P28660 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nckap1P28660 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Nckap1P28660 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nckap1P28660 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.25■□□□□ 0.35
Nckap1P28660 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.25■□□□□ 0.35
Nckap1P28660 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nckap1P28660 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nckap1P28660 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nckap1P28660 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nckap1P28660 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nckap1P28660 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nckap1P28660 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nckap1P28660 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nckap1P28660 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nckap1P28660 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nckap1P28660 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Nckap1P28660 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Nckap1P28660 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nckap1P28660 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nckap1P28660 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nckap1P28660 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nckap1P28660 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nckap1P28660 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.24■□□□□ 0.35
Nckap1P28660 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nckap1P28660 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nckap1P28660 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Nckap1P28660 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nckap1P28660 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nckap1P28660 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nckap1P28660 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nckap1P28660 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nckap1P28660 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nckap1P28660 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Nckap1P28660 Gm27389-201ENSMUST00000183622 195 ntBASIC17.24■□□□□ 0.35
Nckap1P28660 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.24■□□□□ 0.35
Nckap1P28660 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.24■□□□□ 0.35
Nckap1P28660 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nckap1P28660 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nckap1P28660 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nckap1P28660 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nckap1P28660 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nckap1P28660 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nckap1P28660 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nckap1P28660 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nckap1P28660 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nckap1P28660 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.23■□□□□ 0.35
Nckap1P28660 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nckap1P28660 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nckap1P28660 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Nckap1P28660 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nckap1P28660 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nckap1P28660 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.23■□□□□ 0.35
Nckap1P28660 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nckap1P28660 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nckap1P28660 Gm25016-201ENSMUST00000158399 131 ntBASIC17.23■□□□□ 0.35
Nckap1P28660 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.23■□□□□ 0.35
Nckap1P28660 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nckap1P28660 Il3ra-202ENSMUST00000223589 738 ntBASIC17.23■□□□□ 0.35
Nckap1P28660 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Nckap1P28660 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Nckap1P28660 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nckap1P28660 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nckap1P28660 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nckap1P28660 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nckap1P28660 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nckap1P28660 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nckap1P28660 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Nckap1P28660 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Nckap1P28660 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms