Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cbx3P23198 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cbx3P23198 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cbx3P23198 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.84■□□□□ 0.13
Cbx3P23198 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cbx3P23198 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cbx3P23198 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Cbx3P23198 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cbx3P23198 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.83■□□□□ 0.13
Cbx3P23198 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cbx3P23198 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cbx3P23198 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cbx3P23198 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cbx3P23198 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cbx3P23198 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cbx3P23198 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cbx3P23198 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cbx3P23198 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.83■□□□□ 0.12
Cbx3P23198 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cbx3P23198 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Cbx3P23198 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cbx3P23198 Gm5576-201ENSMUST00000075809 1236 ntBASIC15.83■□□□□ 0.12
Cbx3P23198 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cbx3P23198 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cbx3P23198 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cbx3P23198 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Cbx3P23198 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cbx3P23198 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.83■□□□□ 0.12
Cbx3P23198 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cbx3P23198 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cbx3P23198 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cbx3P23198 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cbx3P23198 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Cbx3P23198 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Cbx3P23198 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cbx3P23198 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cbx3P23198 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cbx3P23198 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cbx3P23198 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cbx3P23198 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cbx3P23198 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cbx3P23198 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cbx3P23198 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cbx3P23198 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cbx3P23198 Gm9847-201ENSMUST00000052528 599 ntBASIC15.82■□□□□ 0.12
Cbx3P23198 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cbx3P23198 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cbx3P23198 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cbx3P23198 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cbx3P23198 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cbx3P23198 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cbx3P23198 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.82■□□□□ 0.12
Cbx3P23198 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cbx3P23198 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cbx3P23198 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cbx3P23198 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cbx3P23198 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cbx3P23198 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cbx3P23198 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Cbx3P23198 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cbx3P23198 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cbx3P23198 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cbx3P23198 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cbx3P23198 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cbx3P23198 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cbx3P23198 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cbx3P23198 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cbx3P23198 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cbx3P23198 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cbx3P23198 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cbx3P23198 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Cbx3P23198 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Cbx3P23198 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cbx3P23198 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cbx3P23198 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cbx3P23198 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cbx3P23198 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cbx3P23198 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cbx3P23198 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cbx3P23198 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cbx3P23198 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.8■□□□□ 0.12
Cbx3P23198 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cbx3P23198 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cbx3P23198 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cbx3P23198 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Cbx3P23198 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cbx3P23198 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Cbx3P23198 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cbx3P23198 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC15.8■□□□□ 0.12
Cbx3P23198 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cbx3P23198 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cbx3P23198 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cbx3P23198 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cbx3P23198 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Cbx3P23198 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.8■□□□□ 0.12
Cbx3P23198 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cbx3P23198 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cbx3P23198 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cbx3P23198 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cbx3P23198 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms