Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.92■□□□□ 0.14
Hmgn1P18608 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.92■□□□□ 0.14
Hmgn1P18608 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.92■□□□□ 0.14
Hmgn1P18608 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Hmgn1P18608 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.92■□□□□ 0.14
Hmgn1P18608 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hmgn1P18608 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Hmgn1P18608 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Hmgn1P18608 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hmgn1P18608 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hmgn1P18608 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hmgn1P18608 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Hmgn1P18608 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Hmgn1P18608 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hmgn1P18608 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hmgn1P18608 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.91■□□□□ 0.14
Hmgn1P18608 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Hmgn1P18608 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.91■□□□□ 0.14
Hmgn1P18608 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Hmgn1P18608 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hmgn1P18608 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hmgn1P18608 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hmgn1P18608 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Hmgn1P18608 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Hmgn1P18608 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Hmgn1P18608 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.91■□□□□ 0.14
Hmgn1P18608 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.91■□□□□ 0.14
Hmgn1P18608 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Hmgn1P18608 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Hmgn1P18608 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Hmgn1P18608 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hmgn1P18608 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.9■□□□□ 0.14
Hmgn1P18608 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
Hmgn1P18608 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hmgn1P18608 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Hmgn1P18608 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hmgn1P18608 Gm2399-201ENSMUST00000104944 225 ntBASIC15.9■□□□□ 0.14
Hmgn1P18608 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.9■□□□□ 0.14
Hmgn1P18608 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hmgn1P18608 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hmgn1P18608 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Hmgn1P18608 Zfp783-201ENSMUST00000095946 670 ntBASIC15.9■□□□□ 0.14
Hmgn1P18608 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Hmgn1P18608 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hmgn1P18608 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hmgn1P18608 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hmgn1P18608 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hmgn1P18608 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hmgn1P18608 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hmgn1P18608 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.89■□□□□ 0.13
Hmgn1P18608 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.89■□□□□ 0.13
Hmgn1P18608 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Hmgn1P18608 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC15.89■□□□□ 0.13
Hmgn1P18608 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.89■□□□□ 0.13
Hmgn1P18608 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Hmgn1P18608 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hmgn1P18608 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hmgn1P18608 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hmgn1P18608 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Hmgn1P18608 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hmgn1P18608 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hmgn1P18608 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.89■□□□□ 0.13
Hmgn1P18608 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hmgn1P18608 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hmgn1P18608 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Hmgn1P18608 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Hmgn1P18608 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hmgn1P18608 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hmgn1P18608 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Hmgn1P18608 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hmgn1P18608 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hmgn1P18608 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hmgn1P18608 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hmgn1P18608 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hmgn1P18608 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.88■□□□□ 0.13
Hmgn1P18608 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hmgn1P18608 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hmgn1P18608 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Hmgn1P18608 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hmgn1P18608 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hmgn1P18608 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hmgn1P18608 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hmgn1P18608 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hmgn1P18608 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hmgn1P18608 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hmgn1P18608 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Hmgn1P18608 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
Hmgn1P18608 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Hmgn1P18608 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.87■□□□□ 0.13
Hmgn1P18608 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Hmgn1P18608 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Hmgn1P18608 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.87■□□□□ 0.13
Hmgn1P18608 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Hmgn1P18608 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hmgn1P18608 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hmgn1P18608 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.87■□□□□ 0.13
Hmgn1P18608 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hmgn1P18608 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Hmgn1P18608 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hmgn1P18608 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms