Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.06■□□□□ 0.32
Srp54P14576 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Srp54P14576 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Srp54P14576 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Srp54P14576 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Srp54P14576 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.06■□□□□ 0.32
Srp54P14576 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Srp54P14576 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Srp54P14576 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Srp54P14576 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Srp54P14576 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Srp54P14576 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Srp54P14576 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Srp54P14576 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Srp54P14576 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Srp54P14576 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Srp54P14576 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Srp54P14576 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.06■□□□□ 0.32
Srp54P14576 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Srp54P14576 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.06■□□□□ 0.32
Srp54P14576 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Srp54P14576 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Srp54P14576 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Srp54P14576 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Srp54P14576 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Srp54P14576 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Srp54P14576 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Srp54P14576 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Srp54P14576 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Srp54P14576 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Srp54P14576 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Srp54P14576 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.05■□□□□ 0.32
Srp54P14576 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Srp54P14576 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.05■□□□□ 0.32
Srp54P14576 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.05■□□□□ 0.32
Srp54P14576 Gm18959-201ENSMUST00000208954 655 ntBASIC17.05■□□□□ 0.32
Srp54P14576 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Srp54P14576 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Srp54P14576 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Srp54P14576 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Srp54P14576 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Srp54P14576 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Srp54P14576 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Srp54P14576 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Srp54P14576 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Srp54P14576 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.05■□□□□ 0.32
Srp54P14576 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Srp54P14576 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Srp54P14576 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Srp54P14576 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.04■□□□□ 0.32
Srp54P14576 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Srp54P14576 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Srp54P14576 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Srp54P14576 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.04■□□□□ 0.32
Srp54P14576 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.04■□□□□ 0.32
Srp54P14576 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Srp54P14576 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Srp54P14576 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Srp54P14576 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Srp54P14576 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.04■□□□□ 0.32
Srp54P14576 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.04■□□□□ 0.32
Srp54P14576 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.04■□□□□ 0.32
Srp54P14576 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Srp54P14576 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Srp54P14576 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Srp54P14576 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Srp54P14576 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Srp54P14576 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Srp54P14576 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Srp54P14576 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Srp54P14576 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Srp54P14576 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Srp54P14576 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Srp54P14576 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Srp54P14576 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Srp54P14576 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.03■□□□□ 0.32
Srp54P14576 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.03■□□□□ 0.32
Srp54P14576 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Srp54P14576 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Srp54P14576 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Srp54P14576 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Srp54P14576 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.03■□□□□ 0.32
Srp54P14576 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Srp54P14576 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Srp54P14576 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Srp54P14576 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Srp54P14576 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Srp54P14576 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Srp54P14576 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Srp54P14576 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Srp54P14576 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Srp54P14576 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Srp54P14576 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Srp54P14576 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Srp54P14576 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Srp54P14576 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Srp54P14576 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Srp54P14576 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Srp54P14576 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Srp54P14576 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms