Protein–RNA interactions for Protein: P13705

Msh3, DNA mismatch repair protein Msh3, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3P13705 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh3P13705 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Msh3P13705 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.09■□□□□ 0.65
Msh3P13705 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Msh3P13705 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh3P13705 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh3P13705 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Msh3P13705 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.08■□□□□ 0.65
Msh3P13705 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Msh3P13705 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
Msh3P13705 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Msh3P13705 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.08■□□□□ 0.64
Msh3P13705 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
Msh3P13705 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
Msh3P13705 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Msh3P13705 Timm23-208ENSMUST00000226683 750 ntBASIC19.08■□□□□ 0.64
Msh3P13705 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Msh3P13705 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Msh3P13705 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Msh3P13705 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Msh3P13705 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Msh3P13705 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.08■□□□□ 0.64
Msh3P13705 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Msh3P13705 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Msh3P13705 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Msh3P13705 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Msh3P13705 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Msh3P13705 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Msh3P13705 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.07■□□□□ 0.64
Msh3P13705 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Msh3P13705 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Msh3P13705 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh3P13705 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh3P13705 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh3P13705 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.07■□□□□ 0.64
Msh3P13705 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh3P13705 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh3P13705 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.07■□□□□ 0.64
Msh3P13705 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Msh3P13705 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.07■□□□□ 0.64
Msh3P13705 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh3P13705 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Msh3P13705 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh3P13705 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh3P13705 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh3P13705 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh3P13705 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh3P13705 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Msh3P13705 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Msh3P13705 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Msh3P13705 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Msh3P13705 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Msh3P13705 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh3P13705 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Msh3P13705 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh3P13705 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh3P13705 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh3P13705 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh3P13705 Gm12085-201ENSMUST00000119263 940 ntBASIC19.06■□□□□ 0.64
Msh3P13705 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Msh3P13705 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh3P13705 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.06■□□□□ 0.64
Msh3P13705 Gm3375-201ENSMUST00000203929 796 ntBASIC19.06■□□□□ 0.64
Msh3P13705 Il3ra-202ENSMUST00000223589 738 ntBASIC19.06■□□□□ 0.64
Msh3P13705 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh3P13705 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
Msh3P13705 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.06■□□□□ 0.64
Msh3P13705 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.06■□□□□ 0.64
Msh3P13705 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh3P13705 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Msh3P13705 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh3P13705 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Msh3P13705 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.06■□□□□ 0.64
Msh3P13705 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Msh3P13705 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Msh3P13705 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh3P13705 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.05■□□□□ 0.64
Msh3P13705 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh3P13705 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh3P13705 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh3P13705 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Msh3P13705 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Msh3P13705 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh3P13705 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh3P13705 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.05■□□□□ 0.64
Msh3P13705 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh3P13705 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.05■□□□□ 0.64
Msh3P13705 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Msh3P13705 Gm9731-201ENSMUST00000209480 747 ntBASIC19.05■□□□□ 0.64
Msh3P13705 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh3P13705 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Msh3P13705 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Msh3P13705 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh3P13705 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh3P13705 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh3P13705 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh3P13705 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh3P13705 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Msh3P13705 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Msh3P13705 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms