Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
Cntn1P12960 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cntn1P12960 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cntn1P12960 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Cntn1P12960 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cntn1P12960 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.66■□□□□ 0.26
Cntn1P12960 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cntn1P12960 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cntn1P12960 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cntn1P12960 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cntn1P12960 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
Cntn1P12960 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Cntn1P12960 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Cntn1P12960 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.66■□□□□ 0.26
Cntn1P12960 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cntn1P12960 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Cntn1P12960 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cntn1P12960 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cntn1P12960 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cntn1P12960 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cntn1P12960 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cntn1P12960 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cntn1P12960 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cntn1P12960 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cntn1P12960 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Cntn1P12960 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cntn1P12960 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cntn1P12960 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cntn1P12960 Gm27463-201ENSMUST00000183569 57 ntBASIC16.65■□□□□ 0.26
Cntn1P12960 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cntn1P12960 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.65■□□□□ 0.26
Cntn1P12960 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.65■□□□□ 0.26
Cntn1P12960 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cntn1P12960 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cntn1P12960 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cntn1P12960 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cntn1P12960 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cntn1P12960 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cntn1P12960 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cntn1P12960 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cntn1P12960 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Cntn1P12960 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cntn1P12960 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Cntn1P12960 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cntn1P12960 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cntn1P12960 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cntn1P12960 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cntn1P12960 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cntn1P12960 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cntn1P12960 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cntn1P12960 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.64■□□□□ 0.25
Cntn1P12960 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.64■□□□□ 0.25
Cntn1P12960 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.64■□□□□ 0.25
Cntn1P12960 Gm10231-201ENSMUST00000181584 441 ntBASIC16.64■□□□□ 0.25
Cntn1P12960 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cntn1P12960 Gm7977-201ENSMUST00000193787 748 ntBASIC16.64■□□□□ 0.25
Cntn1P12960 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.64■□□□□ 0.25
Cntn1P12960 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.64■□□□□ 0.25
Cntn1P12960 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cntn1P12960 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cntn1P12960 Gm10175-202ENSMUST00000208752 441 ntBASIC16.64■□□□□ 0.25
Cntn1P12960 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cntn1P12960 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.64■□□□□ 0.25
Cntn1P12960 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cntn1P12960 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.64■□□□□ 0.25
Cntn1P12960 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.64■□□□□ 0.25
Cntn1P12960 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cntn1P12960 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cntn1P12960 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cntn1P12960 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cntn1P12960 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cntn1P12960 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cntn1P12960 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cntn1P12960 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cntn1P12960 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.63■□□□□ 0.25
Cntn1P12960 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Cntn1P12960 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cntn1P12960 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cntn1P12960 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cntn1P12960 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Cntn1P12960 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cntn1P12960 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cntn1P12960 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cntn1P12960 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cntn1P12960 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.62■□□□□ 0.25
Cntn1P12960 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.62■□□□□ 0.25
Cntn1P12960 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.62■□□□□ 0.25
Cntn1P12960 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cntn1P12960 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.62■□□□□ 0.25
Cntn1P12960 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cntn1P12960 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cntn1P12960 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cntn1P12960 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cntn1P12960 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.62■□□□□ 0.25
Cntn1P12960 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cntn1P12960 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.61■□□□□ 0.25
Cntn1P12960 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cntn1P12960 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cntn1P12960 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cntn1P12960 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms