Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PtcraP0C6B2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PtcraP0C6B2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PtcraP0C6B2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
PtcraP0C6B2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PtcraP0C6B2 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PtcraP0C6B2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.08■□□□□ 0.01
PtcraP0C6B2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
PtcraP0C6B2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
PtcraP0C6B2 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
PtcraP0C6B2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PtcraP0C6B2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PtcraP0C6B2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.08■□□□□ 0
PtcraP0C6B2 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PtcraP0C6B2 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.08■□□□□ 0
PtcraP0C6B2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PtcraP0C6B2 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
PtcraP0C6B2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.08■□□□□ 0
PtcraP0C6B2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.08■□□□□ 0
PtcraP0C6B2 Gm10812-201ENSMUST00000099864 546 ntBASIC15.08■□□□□ 0
PtcraP0C6B2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.08■□□□□ 0
PtcraP0C6B2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
PtcraP0C6B2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
PtcraP0C6B2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.08■□□□□ 0
PtcraP0C6B2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PtcraP0C6B2 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.07■□□□□ 0
PtcraP0C6B2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.07■□□□□ 0
PtcraP0C6B2 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.07■□□□□ 0
PtcraP0C6B2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.07■□□□□ 0
PtcraP0C6B2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PtcraP0C6B2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.07■□□□□ 0
PtcraP0C6B2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.07■□□□□ 0
PtcraP0C6B2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PtcraP0C6B2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
PtcraP0C6B2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PtcraP0C6B2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
PtcraP0C6B2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.07■□□□□ 0
PtcraP0C6B2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.07■□□□□ 0
PtcraP0C6B2 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.07■□□□□ 0
PtcraP0C6B2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.07■□□□□ 0
PtcraP0C6B2 Gm37025-201ENSMUST00000195159 829 ntBASIC15.07■□□□□ 0
PtcraP0C6B2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.07■□□□□ 0
PtcraP0C6B2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PtcraP0C6B2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PtcraP0C6B2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.07■□□□□ 0
PtcraP0C6B2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PtcraP0C6B2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
PtcraP0C6B2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
PtcraP0C6B2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PtcraP0C6B2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PtcraP0C6B2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PtcraP0C6B2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PtcraP0C6B2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PtcraP0C6B2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PtcraP0C6B2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PtcraP0C6B2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PtcraP0C6B2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
PtcraP0C6B2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
PtcraP0C6B2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PtcraP0C6B2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PtcraP0C6B2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
PtcraP0C6B2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.06■□□□□ 0
PtcraP0C6B2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PtcraP0C6B2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.06■□□□□ 0
PtcraP0C6B2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PtcraP0C6B2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.06■□□□□ 0
PtcraP0C6B2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
PtcraP0C6B2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PtcraP0C6B2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PtcraP0C6B2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PtcraP0C6B2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PtcraP0C6B2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.06■□□□□ 0
PtcraP0C6B2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PtcraP0C6B2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.06■□□□□ 0
PtcraP0C6B2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.05■□□□□ 0
PtcraP0C6B2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PtcraP0C6B2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.05■□□□□ 0
PtcraP0C6B2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PtcraP0C6B2 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.05■□□□□ 0
PtcraP0C6B2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PtcraP0C6B2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.05■□□□□ 0
PtcraP0C6B2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.05■□□□□ 0
PtcraP0C6B2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PtcraP0C6B2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
PtcraP0C6B2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.05■□□□□ -0
PtcraP0C6B2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.05■□□□□ -0
PtcraP0C6B2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.05■□□□□ -0
PtcraP0C6B2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.05■□□□□ -0
PtcraP0C6B2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.05■□□□□ -0
PtcraP0C6B2 Gm17661-201ENSMUST00000170317 270 ntBASIC15.05■□□□□ -0
PtcraP0C6B2 Timm23-208ENSMUST00000226683 750 ntBASIC15.05■□□□□ -0
PtcraP0C6B2 Odf3b-204ENSMUST00000227834 930 ntBASIC15.05■□□□□ -0
PtcraP0C6B2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.05■□□□□ -0
PtcraP0C6B2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.05■□□□□ -0
PtcraP0C6B2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.05■□□□□ -0
PtcraP0C6B2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PtcraP0C6B2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.05■□□□□ -0
PtcraP0C6B2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PtcraP0C6B2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.05■□□□□ -0
PtcraP0C6B2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms