Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxa9P09631 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxa9P09631 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxa9P09631 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxa9P09631 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxa9P09631 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxa9P09631 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxa9P09631 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxa9P09631 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxa9P09631 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxa9P09631 Gm27389-201ENSMUST00000183622 195 ntBASIC17.45■□□□□ 0.38
Hoxa9P09631 Mir1668-201ENSMUST00000184114 107 ntBASIC17.45■□□□□ 0.38
Hoxa9P09631 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.45■□□□□ 0.38
Hoxa9P09631 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxa9P09631 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Hoxa9P09631 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxa9P09631 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxa9P09631 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxa9P09631 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.44■□□□□ 0.38
Hoxa9P09631 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Hoxa9P09631 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxa9P09631 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.44■□□□□ 0.38
Hoxa9P09631 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxa9P09631 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.44■□□□□ 0.38
Hoxa9P09631 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxa9P09631 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Hoxa9P09631 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
Hoxa9P09631 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxa9P09631 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Hoxa9P09631 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxa9P09631 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxa9P09631 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Hoxa9P09631 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxa9P09631 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxa9P09631 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxa9P09631 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Hoxa9P09631 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxa9P09631 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.43■□□□□ 0.38
Hoxa9P09631 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.43■□□□□ 0.38
Hoxa9P09631 Gm14859-201ENSMUST00000117752 357 ntBASIC17.43■□□□□ 0.38
Hoxa9P09631 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.43■□□□□ 0.38
Hoxa9P09631 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.43■□□□□ 0.38
Hoxa9P09631 Gm7370-201ENSMUST00000219471 767 ntBASIC17.43■□□□□ 0.38
Hoxa9P09631 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxa9P09631 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxa9P09631 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxa9P09631 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxa9P09631 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxa9P09631 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxa9P09631 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxa9P09631 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxa9P09631 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxa9P09631 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxa9P09631 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxa9P09631 Gm21559-201ENSMUST00000220638 855 ntBASIC17.42■□□□□ 0.38
Hoxa9P09631 Gm8587-201ENSMUST00000076538 843 ntBASIC17.42■□□□□ 0.38
Hoxa9P09631 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxa9P09631 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxa9P09631 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxa9P09631 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxa9P09631 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.42■□□□□ 0.38
Hoxa9P09631 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxa9P09631 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Hoxa9P09631 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxa9P09631 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxa9P09631 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxa9P09631 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxa9P09631 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxa9P09631 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Hoxa9P09631 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxa9P09631 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxa9P09631 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxa9P09631 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxa9P09631 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.41■□□□□ 0.38
Hoxa9P09631 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxa9P09631 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxa9P09631 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxa9P09631 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Hoxa9P09631 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.41■□□□□ 0.38
Hoxa9P09631 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxa9P09631 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxa9P09631 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.41■□□□□ 0.38
Hoxa9P09631 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxa9P09631 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxa9P09631 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxa9P09631 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxa9P09631 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxa9P09631 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxa9P09631 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxa9P09631 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxa9P09631 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.4■□□□□ 0.38
Hoxa9P09631 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxa9P09631 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Hoxa9P09631 Gm9013-201ENSMUST00000132939 882 ntBASIC17.4■□□□□ 0.38
Hoxa9P09631 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxa9P09631 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxa9P09631 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Hoxa9P09631 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Hoxa9P09631 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxa9P09631 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms