Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cd74P04441 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Cd74P04441 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cd74P04441 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.6□□□□□ -0.07
Cd74P04441 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cd74P04441 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd74P04441 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd74P04441 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd74P04441 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cd74P04441 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd74P04441 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd74P04441 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd74P04441 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd74P04441 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cd74P04441 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd74P04441 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd74P04441 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd74P04441 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd74P04441 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd74P04441 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.6□□□□□ -0.07
Cd74P04441 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Cd74P04441 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cd74P04441 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd74P04441 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.6□□□□□ -0.07
Cd74P04441 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cd74P04441 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd74P04441 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd74P04441 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd74P04441 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd74P04441 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd74P04441 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd74P04441 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd74P04441 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cd74P04441 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd74P04441 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cd74P04441 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd74P04441 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cd74P04441 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd74P04441 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd74P04441 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd74P04441 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cd74P04441 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd74P04441 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd74P04441 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd74P04441 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd74P04441 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd74P04441 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.59□□□□□ -0.07
Cd74P04441 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd74P04441 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd74P04441 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cd74P04441 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd74P04441 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Cd74P04441 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd74P04441 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd74P04441 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.58□□□□□ -0.08
Cd74P04441 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd74P04441 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Cd74P04441 Mir6982-201ENSMUST00000184354 68 ntBASIC14.58□□□□□ -0.08
Cd74P04441 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.58□□□□□ -0.08
Cd74P04441 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd74P04441 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.58□□□□□ -0.08
Cd74P04441 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.58□□□□□ -0.08
Cd74P04441 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd74P04441 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cd74P04441 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cd74P04441 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd74P04441 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd74P04441 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd74P04441 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd74P04441 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd74P04441 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cd74P04441 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cd74P04441 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.57□□□□□ -0.08
Cd74P04441 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd74P04441 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd74P04441 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.57□□□□□ -0.08
Cd74P04441 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd74P04441 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd74P04441 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd74P04441 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd74P04441 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd74P04441 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Cd74P04441 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd74P04441 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd74P04441 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd74P04441 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.57□□□□□ -0.08
Cd74P04441 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd74P04441 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd74P04441 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd74P04441 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd74P04441 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd74P04441 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd74P04441 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd74P04441 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Cd74P04441 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd74P04441 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cd74P04441 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd74P04441 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd74P04441 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd74P04441 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms