Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.43■■□□□ 1.02
Col4a1P02463 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col4a1P02463 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Col4a1P02463 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col4a1P02463 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.42■■□□□ 1.02
Col4a1P02463 Gm24589-201ENSMUST00000116692 94 ntBASIC21.42■■□□□ 1.02
Col4a1P02463 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col4a1P02463 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col4a1P02463 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.42■■□□□ 1.02
Col4a1P02463 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Col4a1P02463 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Col4a1P02463 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Col4a1P02463 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Col4a1P02463 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Col4a1P02463 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.41■■□□□ 1.02
Col4a1P02463 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Col4a1P02463 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Col4a1P02463 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.41■■□□□ 1.02
Col4a1P02463 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Col4a1P02463 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC21.41■■□□□ 1.02
Col4a1P02463 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC21.41■■□□□ 1.02
Col4a1P02463 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Col4a1P02463 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Col4a1P02463 Gm18115-201ENSMUST00000221209 621 ntBASIC21.4■■□□□ 1.02
Col4a1P02463 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Col4a1P02463 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Col4a1P02463 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Col4a1P02463 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Col4a1P02463 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Col4a1P02463 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Col4a1P02463 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
Col4a1P02463 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Col4a1P02463 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
Col4a1P02463 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC21.4■■□□□ 1.02
Col4a1P02463 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Col4a1P02463 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Col4a1P02463 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Col4a1P02463 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC21.4■■□□□ 1.02
Col4a1P02463 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Col4a1P02463 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Col4a1P02463 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Col4a1P02463 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
Col4a1P02463 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Col4a1P02463 Spr-ps1-201ENSMUST00000089584 605 ntBASIC21.39■■□□□ 1.01
Col4a1P02463 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Col4a1P02463 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Col4a1P02463 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Col4a1P02463 Wnt10b-204ENSMUST00000226655 1807 ntBASIC21.38■■□□□ 1.01
Col4a1P02463 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Col4a1P02463 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC21.38■■□□□ 1.01
Col4a1P02463 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Col4a1P02463 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Col4a1P02463 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Col4a1P02463 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Col4a1P02463 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Col4a1P02463 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Col4a1P02463 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC21.37■■□□□ 1.01
Col4a1P02463 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC21.37■■□□□ 1.01
Col4a1P02463 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
Col4a1P02463 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col4a1P02463 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col4a1P02463 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
Col4a1P02463 Phf7-203ENSMUST00000226565 1971 ntBASIC21.37■■□□□ 1.01
Col4a1P02463 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col4a1P02463 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col4a1P02463 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col4a1P02463 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Col4a1P02463 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Col4a1P02463 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Col4a1P02463 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col4a1P02463 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col4a1P02463 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col4a1P02463 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC21.36■■□□□ 1.01
Col4a1P02463 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.36■■□□□ 1.01
Col4a1P02463 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col4a1P02463 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Col4a1P02463 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col4a1P02463 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col4a1P02463 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col4a1P02463 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col4a1P02463 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Col4a1P02463 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col4a1P02463 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC21.35■■□□□ 1.01
Col4a1P02463 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
Col4a1P02463 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col4a1P02463 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col4a1P02463 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col4a1P02463 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC21.34■■□□□ 1.01
Col4a1P02463 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col4a1P02463 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col4a1P02463 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col4a1P02463 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col4a1P02463 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col4a1P02463 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col4a1P02463 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Col4a1P02463 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col4a1P02463 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Col4a1P02463 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col4a1P02463 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Col4a1P02463 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms