Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TcraP01849 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TcraP01849 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TcraP01849 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TcraP01849 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TcraP01849 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.72□□□□□ -0.37
TcraP01849 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TcraP01849 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TcraP01849 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TcraP01849 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
TcraP01849 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC12.72□□□□□ -0.37
TcraP01849 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
TcraP01849 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TcraP01849 Smad6-203ENSMUST00000179458 273 ntBASIC12.72□□□□□ -0.37
TcraP01849 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TcraP01849 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TcraP01849 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TcraP01849 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TcraP01849 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TcraP01849 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TcraP01849 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TcraP01849 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TcraP01849 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TcraP01849 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TcraP01849 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TcraP01849 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TcraP01849 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
TcraP01849 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TcraP01849 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TcraP01849 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
TcraP01849 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TcraP01849 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TcraP01849 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TcraP01849 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
TcraP01849 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TcraP01849 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TcraP01849 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TcraP01849 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TcraP01849 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.71□□□□□ -0.37
TcraP01849 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TcraP01849 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TcraP01849 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TcraP01849 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
TcraP01849 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TcraP01849 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TcraP01849 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC12.71□□□□□ -0.37
TcraP01849 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TcraP01849 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
TcraP01849 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TcraP01849 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
TcraP01849 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TcraP01849 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TcraP01849 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TcraP01849 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
TcraP01849 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.38
TcraP01849 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC12.7□□□□□ -0.38
TcraP01849 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TcraP01849 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
TcraP01849 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TcraP01849 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TcraP01849 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TcraP01849 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC12.7□□□□□ -0.38
TcraP01849 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TcraP01849 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TcraP01849 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TcraP01849 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TcraP01849 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TcraP01849 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TcraP01849 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TcraP01849 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TcraP01849 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC12.7□□□□□ -0.38
TcraP01849 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TcraP01849 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TcraP01849 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TcraP01849 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TcraP01849 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TcraP01849 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TcraP01849 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TcraP01849 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TcraP01849 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TcraP01849 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TcraP01849 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
TcraP01849 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TcraP01849 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.69□□□□□ -0.38
TcraP01849 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TcraP01849 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TcraP01849 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TcraP01849 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TcraP01849 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TcraP01849 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC12.69□□□□□ -0.38
TcraP01849 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TcraP01849 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TcraP01849 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TcraP01849 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC12.69□□□□□ -0.38
TcraP01849 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TcraP01849 Gm27801-201ENSMUST00000184174 223 ntBASIC12.69□□□□□ -0.38
TcraP01849 Gm43173-201ENSMUST00000202246 593 ntBASIC12.69□□□□□ -0.38
TcraP01849 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC12.69□□□□□ -0.38
TcraP01849 AC107452.1-201ENSMUST00000227963 481 ntBASIC12.69□□□□□ -0.38
TcraP01849 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms