Protein–RNA interactions for Protein: P01808

Ig heavy chain V region T601, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01808 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P01808 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
P01808 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
P01808 Mir5122-201ENSMUST00000175004 89 ntBASIC15.72■□□□□ 0.11
P01808 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.72■□□□□ 0.11
P01808 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.72■□□□□ 0.11
P01808 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.72■□□□□ 0.11
P01808 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.72■□□□□ 0.11
P01808 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P01808 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P01808 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
P01808 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P01808 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
P01808 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P01808 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P01808 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P01808 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.72■□□□□ 0.11
P01808 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P01808 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
P01808 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P01808 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.71■□□□□ 0.11
P01808 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
P01808 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
P01808 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P01808 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
P01808 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.71■□□□□ 0.11
P01808 Timm23-208ENSMUST00000226683 750 ntBASIC15.71■□□□□ 0.11
P01808 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P01808 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
P01808 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
P01808 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P01808 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P01808 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
P01808 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
P01808 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
P01808 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
P01808 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
P01808 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
P01808 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.71■□□□□ 0.1
P01808 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
P01808 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
P01808 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P01808 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
P01808 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
P01808 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P01808 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.7■□□□□ 0.1
P01808 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.7■□□□□ 0.1
P01808 Gm38027-201ENSMUST00000192315 235 ntBASIC15.7■□□□□ 0.1
P01808 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
P01808 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P01808 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P01808 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P01808 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
P01808 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
P01808 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
P01808 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P01808 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P01808 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01808 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01808 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01808 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01808 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
P01808 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01808 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
P01808 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01808 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
P01808 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.69■□□□□ 0.1
P01808 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
P01808 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.69■□□□□ 0.1
P01808 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01808 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
P01808 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.69■□□□□ 0.1
P01808 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.69■□□□□ 0.1
P01808 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01808 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
P01808 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.69■□□□□ 0.1
P01808 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01808 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01808 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01808 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
P01808 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01808 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01808 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01808 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01808 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
P01808 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01808 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01808 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01808 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01808 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01808 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
P01808 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01808 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
P01808 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.68■□□□□ 0.1
P01808 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
P01808 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.68■□□□□ 0.1
P01808 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01808 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.68■□□□□ 0.1
P01808 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P01808 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms