Protein–RNA interactions for Protein: P01643

Ig kappa chain V-V region MOPC 173, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01643 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
P01643 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
P01643 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
P01643 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
P01643 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
P01643 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
P01643 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
P01643 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
P01643 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
P01643 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
P01643 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
P01643 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
P01643 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
P01643 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
P01643 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
P01643 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
P01643 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
P01643 Gm13474-201ENSMUST00000122466 815 ntBASIC13.79□□□□□ -0.2
P01643 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.79□□□□□ -0.2
P01643 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
P01643 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.79□□□□□ -0.2
P01643 Il3ra-202ENSMUST00000223589 738 ntBASIC13.79□□□□□ -0.2
P01643 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
P01643 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
P01643 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
P01643 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
P01643 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
P01643 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
P01643 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
P01643 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
P01643 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
P01643 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
P01643 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
P01643 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
P01643 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
P01643 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
P01643 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
P01643 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.78□□□□□ -0.2
P01643 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
P01643 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
P01643 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
P01643 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
P01643 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
P01643 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
P01643 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
P01643 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
P01643 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
P01643 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.78□□□□□ -0.2
P01643 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
P01643 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
P01643 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC13.78□□□□□ -0.2
P01643 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
P01643 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
P01643 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.2
P01643 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
P01643 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
P01643 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
P01643 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
P01643 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
P01643 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
P01643 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
P01643 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
P01643 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.77□□□□□ -0.21
P01643 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
P01643 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
P01643 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.21
P01643 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
P01643 Gm7370-201ENSMUST00000219471 767 ntBASIC13.77□□□□□ -0.21
P01643 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
P01643 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
P01643 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
P01643 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
P01643 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
P01643 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
P01643 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
P01643 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
P01643 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
P01643 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
P01643 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC13.77□□□□□ -0.21
P01643 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
P01643 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P01643 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
P01643 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
P01643 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
P01643 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P01643 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
P01643 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P01643 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
P01643 AA414768-201ENSMUST00000121924 1257 ntBASIC13.76□□□□□ -0.21
P01643 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.76□□□□□ -0.21
P01643 Mir8112-201ENSMUST00000184382 131 ntBASIC13.76□□□□□ -0.21
P01643 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
P01643 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P01643 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
P01643 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
P01643 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.76□□□□□ -0.21
P01643 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P01643 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.76□□□□□ -0.21
P01643 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P01643 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms