Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ifna1P01572 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ifna1P01572 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.68□□□□□ -0.06
Ifna1P01572 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ifna1P01572 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ifna1P01572 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ifna1P01572 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ifna1P01572 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ifna1P01572 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ifna1P01572 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ifna1P01572 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ifna1P01572 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ifna1P01572 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ifna1P01572 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ifna1P01572 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ifna1P01572 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ifna1P01572 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ifna1P01572 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ifna1P01572 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ifna1P01572 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ifna1P01572 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ifna1P01572 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ifna1P01572 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ifna1P01572 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ifna1P01572 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ifna1P01572 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ifna1P01572 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ifna1P01572 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ifna1P01572 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ifna1P01572 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Ifna1P01572 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ifna1P01572 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ifna1P01572 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ifna1P01572 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ifna1P01572 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Ifna1P01572 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Ifna1P01572 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.67□□□□□ -0.06
Ifna1P01572 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ifna1P01572 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
Ifna1P01572 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ifna1P01572 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Ifna1P01572 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ifna1P01572 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ifna1P01572 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ifna1P01572 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.67□□□□□ -0.06
Ifna1P01572 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ifna1P01572 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ifna1P01572 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ifna1P01572 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ifna1P01572 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ifna1P01572 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ifna1P01572 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ifna1P01572 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ifna1P01572 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ifna1P01572 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.66□□□□□ -0.06
Ifna1P01572 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Ifna1P01572 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ifna1P01572 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ifna1P01572 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ifna1P01572 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ifna1P01572 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ifna1P01572 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ifna1P01572 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ifna1P01572 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.66□□□□□ -0.06
Ifna1P01572 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Ifna1P01572 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ifna1P01572 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Ifna1P01572 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ifna1P01572 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ifna1P01572 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ifna1P01572 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ifna1P01572 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ifna1P01572 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ifna1P01572 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ifna1P01572 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ifna1P01572 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ifna1P01572 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.65□□□□□ -0.06
Ifna1P01572 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.65□□□□□ -0.06
Ifna1P01572 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Ifna1P01572 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.65□□□□□ -0.06
Ifna1P01572 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.65□□□□□ -0.06
Ifna1P01572 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ifna1P01572 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Ifna1P01572 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Ifna1P01572 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ifna1P01572 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
Ifna1P01572 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ifna1P01572 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ifna1P01572 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ifna1P01572 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Ifna1P01572 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ifna1P01572 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ifna1P01572 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.64□□□□□ -0.07
Ifna1P01572 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.64□□□□□ -0.07
Ifna1P01572 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ifna1P01572 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ifna1P01572 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ifna1P01572 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ifna1P01572 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ifna1P01572 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms